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2020

Three Dimensional Nuclei Segmentation and Classification of Fluorescence Microscopy Images

Han, S., Lee, S., Chen, A., Yang, C., Salama, P., Dunn, K. W. & Delp, E. J., Apr 2020, ISBI 2020 - 2020 IEEE International Symposium on Biomedical Imaging. IEEE Computer Society, p. 526-530 5 p. 9098560. (Proceedings - International Symposium on Biomedical Imaging; vol. 2020-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

Center-extraction-based three dimensional nuclei instance segmentation of fluorescence microscopy images

Ho, D. J., Han, S., Fu, C., Salama, P., Dunn, K. W. & Delp, E. J., May 2019, 2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8834516. (2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Endoscopic ultrasound and PDT for pancreatic cancer

Dewitt, J., Jan 1 2019, 17th International Photodynamic Association World Congress. Hasan, T. (ed.). SPIE, 110705Y. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11070).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Improving information retrieval from electronic health records using dynamic and multi-collaborative filtering

Fan, Z., Burgun, E., Schleyer, T. & Ning, X., Jun 2019, 2019 IEEE International Conference on Healthcare Informatics, ICHI 2019. Institute of Electrical and Electronics Engineers Inc., 8904731. (2019 IEEE International Conference on Healthcare Informatics, ICHI 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nuclei counting in microscopy images with three dimensional generative adversarial networks

Han, S., Lee, S., Fu, C., Salama, P., Dunn, K. W. & Delp, E. J., Jan 1 2019, Medical Imaging 2019: Image Processing. Angelini, E. D., Angelini, E. D., Angelini, E. D. & Landman, B. A. (eds.). SPIE, 109492Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Three dimensional blind image deconvolution for fluorescence microscopy using generative adversarial networks

Lee, S., Han, S., Salama, P., Dunn, K. W. & Delp, E. J., Apr 2019, ISBI 2019 - 2019 IEEE International Symposium on Biomedical Imaging. IEEE Computer Society, p. 538-542 5 p. 8759250. (Proceedings - International Symposium on Biomedical Imaging; vol. 2019-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2018

Biodynamic 4D imaging of living cancer biopsies for personalized selection of chemotherapy

Nolte, D. D., Li, Z., Choi, H., Turek, J. & Jalal, S., Jan 1 2018, Clinical and Translational Biophotonics, TRANSLATIONAL 2018. OSA - The Optical Society, (Optics InfoBase Conference Papers; vol. Part F91-TRANSLATIONAL 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Intracellular doppler imaging clinical trials in personalized cancer care

Nolte, D. D., Li, Z., Choi, H., Childress, M., Turek, J. & Jalal, S., Jan 1 2018, CLEO: Applications and Technology, CLEO_AT 2018. OSA - The Optical Society, (Optics InfoBase Conference Papers; vol. Part F92-CLEO_AT 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Intracellular Doppler Imaging Clinical Trials in Personalized Cancer Care

Nolte, D. D., Li, Z., Choi, H., Childress, M., Turek, J. & Jalal, S., Aug 6 2018, 2018 Conference on Lasers and Electro-Optics, CLEO 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8426363. (2018 Conference on Lasers and Electro-Optics, CLEO 2018 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Method for Detection and Quantification of Non-Invasive Skin Sympathetic Nerve Activity

Liu, C., Wong, J., Doytchinova, A., Chen, P-S. & Lin, S-F., Nov 1 2018, 2018 International Conference on System Science and Engineering, ICSSE 2018. Institute of Electrical and Electronics Engineers Inc., 8520024

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nuclei detection and segmentation of fluorescence microscopy images using three dimensional convolutional neural networks

Ho, D. J., Fu, C., Salama, P., Dunn, K. W. & Delp, E. J., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 418-422 5 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations

Three dimensional fluorescence microscopy image synthesis and segmentation

Fu, C., Lee, S., Ho, D. J., Han, S., Salama, P., Dunn, K. & Delp, E. J., Dec 13 2018, Proceedings - 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2018. IEEE Computer Society, Vol. 2018-June. p. 2302-2310 9 p. 8575470

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations
2017

An integrated surveillance system to examine testing, services, and outcomes for sexually transmitted diseases

Dixon, B. E., Tao, G., Wang, J., Tu, W., Hoover, S., Zhang, Z., Batteiger, T. A. & Arno, J. N., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. Dongsheng, Z., Gundlapalli, A. V. & Marie-Christine, J. (eds.). IOS Press, p. 361-365 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Boundary segmentation for fluorescence microscopy using steerable filters

Ho, D. J., Salama, P., Dunn, K. W. & Delp, E. J., Jan 1 2017, Medical Imaging 2017: Image Processing. Angelini, E. D., Styner, M. A. & Angelini, E. D. (eds.). SPIE, 101330E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10133).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Comparison of two electronic order forms for medical consultation: Think-aloud usability assessment with referring clinicians

Savoy, A., Patel, H., Flanagan, M. E., Daggy, J. K., Barker, B. C., Slaven, J. E., Porter, B. W., Russ, A. L. & Weiner, M., Jan 1 2017, Proceedings of the Human Factors and Ergonomics Society 2017 International Annual Meeting, HFES 2017. Human Factors an Ergonomics Society Inc., p. 2025-2026 2 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 2017-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nuclei segmentation of fluorescence microscopy images using convolutional neural networks

Fu, C., Ho, D. J., Han, S., Salama, P., Dunn, K. & Delp, E. J., Jun 15 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 704-708 5 p. 7950617

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

Nuclei Segmentation of Fluorescence Microscopy Images Using Three Dimensional Convolutional Neural Networks

Ho, D. J., Fu, C., Salama, P., Dunn, K. & Delp, E. J., Aug 22 2017, Proceedings - 30th IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2017. IEEE Computer Society, Vol. 2017-July. p. 834-842 9 p. 8014850

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations

Pattern Discovery from Directional High-Order Drug-Drug Interaction Relations

Ning, X., Schleyer, T., Shen, L. & Li, L., Sep 8 2017, Proceedings - 2017 IEEE International Conference on Healthcare Informatics, ICHI 2017. Cummins, M., Facelli, J., Meixner, G., Giraud-Carrier, C. & Nakajima, H. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 154-162 9 p. 8031143. (Proceedings - 2017 IEEE International Conference on Healthcare Informatics, ICHI 2017).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Segmentation of fluorescence microscopy images using three dimensional active contours with inhomogeneity correction

Lee, S., Salama, P., Dunn, K. W. & Delp, E. J., Jun 15 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 709-713 5 p. 7950618. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

8 Scopus citations
2016

Four Dimensional Image Registration for Intravital Microscopy

Fu, C., Gadgil, N., Tahboub, K. K., Salama, P., Dunn, K. & Delp, E. J., Dec 16 2016, Proceedings - 29th IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2016. IEEE Computer Society, p. 1390-1398 9 p. 7789665

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Jelly filling segmentation of fluorescence microscopy images containing incomplete labeling

Gadgil, N. J., Salama, P., Dunn, K. W. & Delp, E. J., Jun 15 2016, 2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Proceedings. IEEE Computer Society, p. 531-535 5 p. 7493324. (Proceedings - International Symposium on Biomedical Imaging; vol. 2016-June).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Nuclei segmentation of fluorescence microscopy images based on midpoint analysis and marked point process

Gadgil, N. J., Salama, P., Dunn, K. & Delp, E. J., Apr 25 2016, 2016 IEEE Southwest Symposium on Image Analysis and Interpretation, SSIAI 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-April. p. 37-40 4 p. 7459169

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations

Supporting information management in ICU rounding a novel mobile system for managing patient-centered notes and action-items

Srinivas, P., Faiola, A. J. & Khan, B., Apr 15 2016, 2015 17th International Conference on E-Health Networking, Application and Services, HealthCom 2015. Institute of Electrical and Electronics Engineers Inc., p. 590-593 4 p. 7454571

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2015

Boundary fitting based segmentation of fluorescence microscopy images

Lee, S., Salama, P., Dunn, K. W. & Delp, E. J., Jan 1 2015, Proceedings of SPIE-IS and T Electronic Imaging - Imaging and Multimedia Analytics in a Web and Mobile World 2015. Allebach, J. P., Fan, Z. & Lin, Q. (eds.). SPIE, 940805. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 9408).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Building Comprehensive and Sustainable Health Informatics Institutions in Developing Countries: Moi University Experience

Were, M. C., Siika, A., Ayuo, P. O., Atwoli, L. & Esamai, F., 2015, Studies in Health Technology and Informatics. IOS Press, Vol. 216. p. 520-524 5 p. (Studies in Health Technology and Informatics; vol. 216).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Clinicians as secondary users of patient-centered mobile technology in complex healthcare settings

Tunnell, H. D., Faiola, A. J., Haggstrom, D. A. & Srinivas, P., Jan 1 2015, 2015 17th International Conference on E-Health Networking, Application and Services, HealthCom 2015. Institute of Electrical and Electronics Engineers Inc., p. 657-660 4 p. 7454586. (2015 17th International Conference on E-Health Networking, Application and Services, HealthCom 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Detecting anomalous care pathways in long-term care network

Keno, H., Kong, N., Landry, S., Tu, W. & Callahan, C. M., Jan 1 2015, IIE Annual Conference and Expo 2015. Institute of Industrial Engineers, p. 218-224 7 p. (IIE Annual Conference and Expo 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Employing decision-centered design to develop decision support for colorectal cancer screening (extended abstract)

Militello, L., Borders, M., Sushereba, C., Diiulio, J., Doebbeling, B., Imperiale, T. & Saleem, J., 2015, 2015 International Annual Meeting of the Human Factors and Ergonomics Society, HFES 2015. Human Factors an Ergonomics Society Inc., Vol. 2015-January. p. 486-487 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Evaluating lean implementation: Challenges in developing a research agenda for lean enterprise transformation in healthcare

Miech, E., Bravata, D. & Woodward-Hagg, H., 2015, IIE Annual Conference and Expo 2015. Institute of Industrial Engineers, p. 2172-2180 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Identification of Patients with Family History of Pancreatic Cancer-Investigation of an NLP System Portability

Mehrabi, S., Krishnan, A., Roch, A. M., Schmidt, H., Li, D., Kesterson, J., Beesley, C., Dexter, P., Schmidt, C., Palakal, M. & Liu, H., 2015, Studies in Health Technology and Informatics. IOS Press, Vol. 216. p. 604-608 5 p. (Studies in Health Technology and Informatics; vol. 216).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

8 Scopus citations

Segmentation of vascular structures and hematopoietic cells in 3D microscopy images and quantitative analysis

Mu, J., Yang, L., Kamocka, M., Zollman, A. L., Carlesso, N. & Chen, D. Z., 2015, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. SPIE, Vol. 9413. 941305

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2014

Challenges when engaging diabetic patients and their clinicians in using e-health technologies to improve clinical outcomes

Dixon, B. E., Jabour, A. M., O'Kelly Phillips, E. & Marrero, D. G., Jan 1 2014, Universal Access in Human-Computer Interaction: Aging and Assistive Environments - 8th International Conference, UAHCI 2014, Held as Part of HCI International 2014, Proceedings. PART 3 ed. Springer Verlag, p. 238-247 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8515 LNCS, no. PART 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

MiR-210: Fine-tuning the hypoxic response

Ivan, M. & Huang, X., 2014, Tumor Microenvironment and Cellular Stress: Signaling, Metabolism, Imaging, and Therapeutic Targets. Springer New York LLC, p. 205-227 23 p. (Advances in Experimental Medicine and Biology; vol. 772).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

56 Scopus citations

MiR-210: Fine-tuning the hypoxic response

Ivan, M. & Huang, X., 2014, Advances in Experimental Medicine and Biology. Vol. 772. p. 205-227 23 p. (Advances in Experimental Medicine and Biology; vol. 772).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2013

An efficient pancreatic cyst identification methodology using natural language processing

Mehrabi, S., Schmidt, C. M., Waters, J. A., Beesley, C., Krishnan, A., Kesterson, J., Dexter, P., Al-Haddad, M. A., Tierney, W. M. & Palakal, M., Jan 1 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, p. 822-826 5 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

8 Scopus citations

Effect of EMR implementation on clinic time, patient and staff satisfaction, and chart completeness in a resource-limited antenatal clinic in Kenya

Gray, A., Henshaw, C., Wright, J., Leah, J., Caloia, D., Spitzer, R. F., Omenge, E., Chemwolo, B. & Tierney, W. M., Jan 1 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, 1 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Efficiency strategies for facilitating computerized clinical documentation in ambulatory care

Saleem, J. J., Adams, S., Frankel, R. M., Doebbeling, B. N. & Patterson, E. S., Jan 1 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, p. 13-17 5 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Experience implementing electronic health records in the antenatal clinic of a teaching and referral hospital in Kenya

Chemwolo, B., Caloia, D., Wools-Kaloustian, K., Sidle, J., Spitzer, R. F., Were, M., Bell, A. & Tierney, W. M., Jan 1 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, 1 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Improving medication adherence for chronic disease using integrated e-Technologies

Dixon, B. E., Jabour, A. M., Phillips, E. O. K. & Marrero, D. G., Jan 1 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, 1 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Three dimensional segmentation of fluorescence microscopy images using active surfaces

Lorenz, K. S., Salama, P., Dunn, K. W. & Delp, E. J., Dec 1 2013, 2013 IEEE International Conference on Image Processing, ICIP 2013 - Proceedings. p. 1153-1157 5 p. 6738238. (2013 IEEE International Conference on Image Processing, ICIP 2013 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

Treating acute myeloid leukemia via HSC transplantation: A preliminary study of multi-objective personalization strategies

Chakrabarty, A., Pearce, S. M., Nelson, R. P. & Rundell, A. E., Sep 11 2013, 2013 American Control Conference, ACC 2013. p. 3790-3795 6 p. 6580417. (Proceedings of the American Control Conference).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Usability of implementing a tablet-based decision support and integrated record-keeping (DESIRE) tool in the nurse management of hypertension in rural Kenya

Blank, E., Tuikong, N., Misoi, L., Kamano, J., Hutchinson, C., Kimaiyo, S., Fustera, V., Were, M. & Vedanthan, R., Jan 1 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, 1 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations
2012

A multi-resolution approach to non-rigid registration of microscopy images

Lorenz, K. S., Salama, P., Dunn, K. W. & Delp, E. J., Aug 15 2012, 2012 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2012 - Proceedings. p. 198-201 4 p. 6235518. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Design of a phone-based clinical decision support system for resource-limited settings

Anokwa, Y., Ribeka, N., Parikh, T., Borriello, G. & Were, M. C., Apr 2 2012, Proceedings of the 5th International Conference on Information and Communication Technologies and Development, ICTD 2012. p. 13-24 12 p. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

21 Scopus citations

Micro-aperture chip system for high-throughput immunomagnetic cell detection

Chang, C. L., Savran, C. A., Jalal, S. & Matei, D. E., Dec 1 2012, IEEE SENSORS 2012 - Proceedings. 6411336. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Modelling irregular samples for analyzing the risk of complications of diabetes mellitus

Kim, D. S. & Walsh, J. P., May 8 2012, Proceedings of the 6th International Conference on Ubiquitous Information Management and Communication, ICUIMC'12. 37. (Proceedings of the 6th International Conference on Ubiquitous Information Management and Communication, ICUIMC'12).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Optical mapping of the effect of pacing rate and I kr blocker, Dofetilide, on heterogeneity of action potential duration between rabbit right and left ventricle

Yang, L., Li, L., Sun, H. M., Kong, S., Yang, Z., Zhang, H. & Lin, S. F., Oct 1 2012, Proceedings - 2012 International Conference on Biomedical Engineering and Biotechnology, iCBEB 2012. p. 393-395 3 p. 6245137. (Proceedings - 2012 International Conference on Biomedical Engineering and Biotechnology, iCBEB 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Reading engagement offsets declines in processing capacity for health literacy

Yamani, Y., Chin, J., Meyers, E. A. G., Gao, X., Morrow, D. G., Stine-Morrow, E. A. L., Conner-Garcia, T., Graumlich, J. F. & Murray, M. D., Dec 1 2012, Proceedings of the Human Factors and Ergonomics Society 56th Annual Meeting, HFES 2012. p. 916-920 5 p. (Proceedings of the Human Factors and Ergonomics Society).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Wireless measurement of Sympathetic Nervous activity using planar nanoelectrode arrays

Mahmood, A., Chen, P. S. & Akingba, A. G., Dec 1 2012, IEEE SENSORS 2012 - Proceedings. 6411485. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

Nanoelectrode arrays for measuring Sympathetic Nervous Activity

Mahmood, A., Chen, P. S. & George Akingba, A., Dec 1 2011, IEEE Sensors 2011 Conference, SENSORS 2011. p. 1241-1244 4 p. 6127022. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations