Indiana University

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2020

Extended hypoxia-mediated H2S production provides for long-term oxygen sensing

Olson, K. R., Gao, Y., DeLeon, E. R., Markel, T. A., Drucker, N., Boone, D., Whiteman, M., Steiger, A. K., Pluth, M. D., Tessier, C. R. & Stahelin, R. V., Mar 1 2020, In : Acta Physiologica. 228, 3, e13368.

Research output: Contribution to journalArticle

2 Scopus citations

Extending an open-source tool to measure data quality: Case report on Observational Health Data Science and Informatics (OHDSI)

Dixon, B. E., Wen, C., French, T., Williams, J. L., Duke, J. D. & Grannis, S. J., Mar 29 2020, In : BMJ Health and Care Informatics. 27, 1, e100054.

Research output: Contribution to journalArticle

Extensor Mechanism Reconstruction Using Marlex Mesh: Is Postoperative Casting Mandatory?

Buller, L. T., Warth, L. C., Deckard, E. R. & Meneghini, R. M., 2020, (Accepted/In press) In : Journal of Arthroplasty.

Research output: Contribution to journalArticle

Extracellular Superoxide Dismutase Regulates Early Vascular Hyaluronan Remodeling in Hypoxic Pulmonary Hypertension

Tseng, V., Ni, K., Allawzi, A., Prohaska, C., Hernandez-Lagunas, L., Elajaili, H., Cali, V., Midura, R., Hascall, V., Triggs-Raine, B., Petrache, I., Hart, C. M. & Nozik-Grayck, E., Dec 1 2020, In : Scientific reports. 10, 1, 280.

Research output: Contribution to journalArticle

Open Access

Ex vivo culture of mouse skin activates an interleukin 1 alpha-dependent inflammatory response

Zhou, H. M., Slominski, R. M., Seymour, L. J., Bell, M. C., Dave, P., Atumonye, J., Wright, W., Dawes, A., Griesenauer, B., Paczesny, S., Kaplan, M. H., Spandau, D. F. & Turner, M. J., Jan 1 2020, In : Experimental Dermatology. 29, 1, p. 102-106 5 p.

Research output: Contribution to journalArticle

Facebook groups provide effective social support to patients after bariatric surgery

Athanasiadis, D. I., Roper, A., Hilgendorf, W., Voss, A., Zike, T., Embry, M., Banerjee, A., Selzer, D. & Stefanidis, D., 2020, (Accepted/In press) In : Surgical endoscopy.

Research output: Contribution to journalArticle

Factors associated with comprehensive medication review completion rates: A national survey of community pharmacists

Snyder, M. E., Jaynes, H. A., Gernant, S. A., Lantaff, W. M., Doucette, W. R., Hudmon, K. S. & Perkins, S. M., May 2020, In : Research in Social and Administrative Pharmacy. 16, 5, p. 673-680 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Factors Associated with Death in Critically Ill Patients with Coronavirus Disease 2019 in the US

Gupta, S., Hayek, S. S., Wang, W., Chan, L., Mathews, K. S., Melamed, M. L., Brenner, S. K., Leonberg-Yoo, A., Schenck, E. J., Radbel, J., Reiser, J., Bansal, A., Srivastava, A., Zhou, Y., Sutherland, A., Green, A., Shehata, A. M., Goyal, N., Vijayan, A., Velez, J. C. Q. & 14 others, Shaefi, S., Parikh, C. R., Arunthamakun, J., Athavale, A. M., Friedman, A. N., Short, S. A. P., Kibbelaar, Z. A., Abu Omar, S., Admon, A. J., Donnelly, J. P., Gershengorn, H. B., Hernán, M. A., Semler, M. W. & Leaf, D. E., 2020, (Accepted/In press) In : JAMA Internal Medicine.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Factors impacting transition readiness in young adults with neuropathic bladder

Roth, J. D., Szymanski, K. M., Cain, M. P. & Misseri, R., Feb 2020, In : Journal of Pediatric Urology. 16, 1, p. 45.e1-45.e7

Research output: Contribution to journalArticle

Open Access

Factors that influence changes to existing chronic pain management plans

Diiulio, J., Militello, L. G., Andraka-Christou, B. T., Cook, R. L., Hurley, R. W., Downs, S. M., Anders, S., Mamlin, B. W., Danielson, E. C. & Harle, C. A., Feb 2020, In : Journal of the American Board of Family Medicine. 33, 1, p. 42-50 9 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

FAM222A encodes a protein which accumulates in plaques in Alzheimer’s disease

The Alzheimer Disease Neuroimaging Initiative, Dec 1 2020, In : Nature communications. 11, 1, 411.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Features of Blood Clotting on Thromboelastography in Hospitalized Patients With Cirrhosis

Shamseddeen, H., Patidar, K. R., Ghabril, M., Desai, A. P., Nephew, L., Kuehl, S., Chalasani, N. & Orman, E. S., 2020, (Accepted/In press) In : American Journal of Medicine.

Research output: Contribution to journalArticle

Fecal Microbiome Distinguishes Alcohol Consumption From Alcoholic Hepatitis But Does Not Discriminate Disease Severity

Smirnova, E., Puri, P., Muthiah, M. D., Daitya, K., Brown, R., Chalasani, N., Liangpunsakul, S., Shah, V. H., Gelow, K., Siddiqui, M. S., Boyett, S., Mirshahi, F., Sikaroodi, M., Gillevet, P. & Sanyal, A. J., Jul 1 2020, In : Hepatology. 72, 1, p. 271-286 16 p.

Research output: Contribution to journalArticle

4 Scopus citations

Fecal Microbiota Transplantation: Redefining Surgical Management of Refractory Clostridium difficile Infection

Cheng, Y. W. & Fischer, M., Mar 1 2020, In : Clinics in Colon and Rectal Surgery. 33, 2, p. 92-97 6 p.

Research output: Contribution to journalArticle

Fecal Microbiota Transplant Decreases Mortality in Patients with Refractory Severe or Fulminant Clostridioides difficile Infection

Cheng, Y. W., Phelps, E., Nemes, S., Rogers, N., Sagi, S., Bohm, M., El-Halabi, M., Allegretti, J. R., Kassam, Z., Xu, H. & Fischer, M., Sep 2020, In : Clinical Gastroenterology and Hepatology. 18, 10, p. 2234-2243.e1

Research output: Contribution to journalArticle

3 Scopus citations

Feedback quality in an aligned teacher-training program

Bockrath, R., Wright, K., Uchida, T., Petrie, C. & Ryan, E. R., May 2020, In : Family medicine. 52, 5, p. 346-351 6 p.

Research output: Contribution to journalArticle

Open Access

Ferrochelatase regulates retinal neovascularization

Pran Babu, S. P. S., White, D. & Corson, T. W., Sep 1 2020, In : FASEB Journal. 34, 9, p. 12419-12435 17 p.

Research output: Contribution to journalArticle

Open Access

Fibrin clot formation under diverse clotting conditions: Comparing turbidimetry and thromboelastography

Zeng, Z., Fagnon, M., Nallan Chakravarthula, T. & Alves, N. J., Mar 2020, In : Thrombosis Research. 187, p. 48-55 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Five decades of urologic pathology: the accelerating expansion of knowledge in renal cell neoplasia

MacLennan, G. T. & Cheng, L., Jan 2020, In : Human pathology. 95, p. 24-45 22 p.

Research output: Contribution to journalArticle

2 Scopus citations
1 Scopus citations

Flexible Scheduling Policy for Pregnant and New Parent Residents: A Descriptive Pilot Study

Chernoby, K. A., Pettit, K. E., Jansen, J. H. & Welch, J. L., 2020, (Accepted/In press) In : AEM Education and Training.

Research output: Contribution to journalArticle

Open Access

Fluoride exposure from infant formula and child IQ in a Canadian birth cohort

Till, C., Green, R., Flora, D., Hornung, R., Martinez-Mier, E. A., Blazer, M., Farmus, L., Ayotte, P., Muckle, G. & Lanphear, B., Jan 2020, In : Environment International. 134, 105315.

Research output: Contribution to journalArticle

Open Access
5 Scopus citations

FMRP Regulates the Nuclear Export of Adam9 and Psen1 mRNAs: Secondary Analysis of an N 6-Methyladenosine Dataset

Westmark, C. J., Maloney, B., Alisch, R. S., Sokol, D. K. & Lahiri, D. K., Dec 1 2020, In : Scientific reports. 10, 1, 10781.

Research output: Contribution to journalArticle

Open Access

Forever-Fit Summer Camp: The Impact of a 6-Week Summer Healthy Lifestyle Day Camp on Anthropometric, Cardiovascular, and Physical Fitness Measures in Youth With Obesity

El Mikati, H. K., Boateng, A. O., McKinney, B. M., Haberlin-Pittz, K., Pike, J., Perry, P., Hannon, T. S. & Yazel-Smith, L., Jan 1 2020, In : Journal of Primary Care and Community Health. 11

Research output: Contribution to journalArticle

Open Access

Formate dehydrogenase, ubiquinone, and cytochrome bd-I are required for peptidoglycan recognition protein-induced oxidative stress and killing in Escherichia coli

Kashyap, D. R., Kowalczyk, D. A., Shan, Y., Yang, C. K., Gupta, D. & Dziarski, R., Dec 1 2020, In : Scientific reports. 10, 1, 1993.

Research output: Contribution to journalArticle

Open Access

Formation of colorectal liver metastases induces musculoskeletal and metabolic abnormalities consistent with exacerbated cachexia

Huot, J. R., Novinger, L. J., Pin, F., Narasimhan, A., Zimmers, T. A., O'Connell, T. M. & Bonetto, A., May 7 2020, In : JCI Insight. 5, 9, e136687.

Research output: Contribution to journalArticle

Open Access

Frequency of safety net errors in the emergency department: Effect of patient handoffs

Turner, J. S., Courtney, R. D., Sarmiento, E. & Ellender, T. J., Jan 1 2020, (Accepted/In press) In : American Journal of Emergency Medicine.

Research output: Contribution to journalArticle

FTO-Dependent N6-Methyladenosine Modifications Inhibit Ovarian Cancer Stem Cell Self-Renewal by Blocking cAMP Signaling

Huang, H., Wang, Y., Kandpal, M., Zhao, G., Cardenas, H., Ji, Y., Chaparala, A., Tanner, E. J., Chen, J., Davuluri, R. V. & Matei, D., Aug 15 2020, In : Cancer Research. 80, 16, p. 3200-3214 15 p.

Research output: Contribution to journalArticle

1 Scopus citations

Functional brain architecture is associated with the rate of tau accumulation in Alzheimer’s disease

Alzheimer’s Disease Neuroimaging Initiative (ADNI), Dec 1 2020, In : Nature communications. 11, 1, 347.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Further medical experience will be required to validate these results: How experience -based medicine shapes the validity of medical evidence

ESPU research committee, Feb 2020, In : Journal of Pediatric Urology. 16, 1, p. 112-113 2 p.

Research output: Contribution to journalArticle

Gains, losses, and uncertainties from computerizing referrals and consultations

Weiner, M., Savoy, A. & Barker, B. C., Nov 2020, In : Applied Ergonomics. 89, 103227.

Research output: Contribution to journalArticle

Gamma-delta mycosis fungoides in a posttransplant patient

Bittar, J. M., Warren, S. & Mark, L. A., Mar 2020, In : JAAD Case Reports. 6, 3, p. 198-200 3 p.

Research output: Contribution to journalArticle

Open Access

Ganglion cyst of the temporomandibular joint with intradural extension: Case report

Kamer, A. P., Bonnin, J. M., Spinner, R. J. & Cohen-Gadol, A. A., Jan 1 2020, In : Journal of neurosurgery. 132, 3, p. 700-704 5 p.

Research output: Contribution to journalArticle

Gene-Metabolite Network Linked to Inhibited Bioenergetics in Association With Spaceflight-Induced Loss of Male Mouse Quadriceps Muscle

Chakraborty, N., Waning, D. L., Gautam, A., Hoke, A., Sowe, B., Youssef, D., Butler, S., Savaglio, M., Childress, P. J., Kumar, R., Moyler, C., Dimitrov, G., Kacena, M. A. & Hammamieh, R., 2020, (Accepted/In press) In : Journal of Bone and Mineral Research.

Research output: Contribution to journalArticle

Open Access

Generation of transgenic mice that conditionally express microRNA miR-145

Sawant, D., Klevenow, E., Baeten, J. T., Thomas, S., Manivannan, S., Conway, S. J. & Lilly, B., Sep 1 2020, In : Genesis. 58, 9, e23385.

Research output: Contribution to journalArticle

Genetic disruption of the small GTPase RAC1 prevents plexiform neurofibroma formation in mice with neurofibromatosis type 17

Mund, J. A., Park, S. J., Smith, A. E., He, Y., Jiang, L., Hawley, E., Roberson, M. J., Mitchell, D. K., Abu-Sultanah, M., Yuan, J., Bessler, W. K., Sandusky, G., Chen, S., Zhang, C., Rhodes, S. D. & Clapp, D. W., Jul 17 2020, In : The Journal of biological chemistry. 295, 29, p. 9948-9958 11 p.

Research output: Contribution to journalArticle

Genetic factors and risk of type 2 diabetes among women with a history of gestational diabetes: Findings from two independent populations

Li, M., Rahman, M. L., Wu, J., DIng, M., Chavarro, J. E., Lin, Y., Ley, S. H., Bao, W., Grunnet, L. G., Hinkle, S. N., Thuesen, A. C. B., Yeung, E., Gore-Langton, R. E., Sherman, S., Hjort, L., Kampmann, F. B., Bjerregaard, A. A., Damm, P., Tekola-Ayele, F., Liu, A. & 5 others, Mills, J. L., Vaag, A., Olsen, S. F., Hu, F. B. & Zhang, C., Feb 13 2020, In : BMJ Open Diabetes Research and Care. 8, 1, e000850.

Research output: Contribution to journalArticle

Open Access

Genetic screening of a large series of North American sporadic and familial frontotemporal dementia cases

on behalf of the ARTFL/LEFFTDS consortium, Jan 1 2020, In : Alzheimer's and Dementia. 16, 1, p. 118-130 13 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Genetic variants in PDSS1 and SLC16A6 of the ketone body metabolic pathway predict cutaneous melanoma-specific survival

Dai, W., Liu, H., Chen, K., Xu, X., Qian, D., Luo, S., Amos, C. I., Lee, J. E., Li, X., Nan, H., Li, C. & Wei, Q., Jun 1 2020, In : Molecular Carcinogenesis. 59, 6, p. 640-650 11 p.

Research output: Contribution to journalArticle

Genome-wide admixture mapping of DSM-IV alcohol dependence, criterion count, and the self-rating of the effects of ethanol in African American populations

Lai, D., Kapoor, M., Wetherill, L., Schwandt, M., Ramchandani, V. A., Goldman, D., Chao, M., Almasy, L., Bucholz, K., Hart, R. P., Kamarajan, C., Meyers, J. L., Nurnberger, J. I., Tischfield, J., Edenberg, H. J., Schuckit, M., Goate, A., Scott, D. M., Porjesz, B., Agrawal, A. & 1 others, Foroud, T., 2020, (Accepted/In press) In : American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics.

Research output: Contribution to journalArticle

Genome-wide association meta-analyses combining multiple risk phenotypes provide insights into the genetic architecture of cutaneous melanoma susceptibility

AMFS Investigators, MelaNostrum Consortium, GenoMEL Consortium, Q-MEGA and QTWIN Investigators, ATHENS Melanoma Study Group, 23andMe, The SDH Study Group, IBD Investigators & Essen-Heidelberg Investigators, May 1 2020, In : Nature genetics. 52, 5, p. 494-504 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Genome-wide association studies of the self-rating of effects of ethanol (SRE)

Lai, D., Wetherill, L., Kapoor, M., Johnson, E. C., Schwandt, M., Ramchandani, V. A., Goldman, D., Joslyn, G., Rao, X., Liu, Y., Farris, S., Mayfield, R. D., Dick, D., Hesselbrock, V., Kramer, J., McCutcheon, V. V., Nurnberger, J., Tischfield, J., Goate, A., Edenberg, H. J. & 4 others, Porjesz, B., Agrawal, A., Foroud, T. & Schuckit, M., Mar 1 2020, In : Addiction Biology. 25, 2, e12800.

Research output: Contribution to journalArticle

1 Scopus citations

Genome-wide association study of rate of cognitive decline in Alzheimer's disease patients identifies novel genes and pathways

the Alzheimer's Disease Genetics Consortium, Aug 1 2020, In : Alzheimer's and Dementia. 16, 8, p. 1134-1145 12 p.

Research output: Contribution to journalArticle

Genome-wide meta-analysis identifies eight new susceptibility loci for cutaneous squamous cell carcinoma

Sarin, K. Y., Lin, Y., Daneshjou, R., Ziyatdinov, A., Thorleifsson, G., Rubin, A., Pardo, L. M., Wu, W., Khavari, P. A., Uitterlinden, A., Nijsten, T., Toland, A. E., Olafsson, J. H., Sigurgeirsson, B., Thorisdottir, K., Jorgensen, E., Whittemore, A. S., Kraft, P., Stacey, S. N., Stefansson, K. & 2 others, Asgari, M. M. & Han, J., Dec 1 2020, In : Nature communications. 11, 1, 820.

Research output: Contribution to journalArticle

Open Access

Genome-wide meta-analysis of problematic alcohol use in 435,563 individuals yields insights into biology and relationships with other traits

Zhou, H., Sealock, J. M., Sanchez-Roige, S., Clarke, T. K., Levey, D. F., Cheng, Z., Li, B., Polimanti, R., Kember, R. L., Smith, R. V., Thygesen, J. H., Morgan, M. Y., Atkinson, S. R., Thursz, M. R., Nyegaard, M., Mattheisen, M., Børglum, A. D., Johnson, E. C., Justice, A. C., Palmer, A. A. & 6 others, McQuillin, A., Davis, L. K., Edenberg, H. J., Agrawal, A., Kranzler, H. R. & Gelernter, J., Jul 1 2020, In : Nature Neuroscience. 23, 7, p. 809-818 10 p.

Research output: Contribution to journalArticle