Publications

2019

Changes in rapid hiv treatment initiation after national “treat all” policy adoption in 6 sub-saharan african countries: Regression discontinuity analysis

Tymejczyk, O., Brazier, E., Yiannoutsos, C. T., Vinikoor, M., van Lettow, M., Nalugoda, F., Urassa, M., Sinayobye, J. DA., Rebeiro, P. F., Wools-Kaloustian, K., Davies, M. A., Zaniewski, E., Anderegg, N., Liu, G., Ford, N. & Nash, D., Jun 2019, In : PLoS Medicine. 16, 6, e1002822.

Research output: Contribution to journalArticle

Open Access
10 Scopus citations

Characteristics, aetiologies and trends of hepatocellular carcinoma in patients without cirrhosis: a United States multicentre study

Gawrieh, S., Dakhoul, L., Miller, E., Scanga, A., deLemos, A., Kettler, C., Burney, H., Liu, H., Abu-Sbeih, H., Chalasani, N. & Wattacheril, J., Oct 1 2019, In : Alimentary Pharmacology and Therapeutics. 50, 7, p. 809-821 13 p.

Research output: Contribution to journalArticle

10 Scopus citations

Circulating Leptin and Branched Chain Amino Acids—Correlation with Intraductal Papillary Mucinous Neoplasm Dysplastic Grade

Yip-Schneider, M. T., Simpson, R., Carr, R. A., Wu, H., Fan, H., Liu, Z., Korc, M., Zhang, J. & Schmidt, C. M., May 15 2019, In : Journal of Gastrointestinal Surgery. 23, 5, p. 966-974 9 p.

Research output: Contribution to journalArticle

2 Scopus citations

Circulating Thrombospondin-2 enhances prediction of malignant intraductal papillary mucinous neoplasm

Simpson, R. E., Yip-Schneider, M. T., Wu, H., Fan, H., Liu, Z., Korc, M., Zhang, J. & Schmidt, C. M., Mar 2019, In : American Journal of Surgery. 217, 3, p. 425-428 4 p.

Research output: Contribution to journalArticle

4 Scopus citations

Clinical and genome-wide analysis of serum platinum levels after cisplatin-based chemotherapy

Trendowski, M. R., El-Charif, O., Ratain, M. J., Monahan, P., Mu, Z., Wheeler, H. E., Dinh, P. C., Feldman, D. R., Ardeshir-Rouhani-Fard, S., Hamilton, R. J., Vaughn, D. J., Fung, C., Kollmannsberger, C., Mushiroda, T., Kubo, M., Hannigan, R., Strathmann, F., Einhorn, L. H., Fossa, S. D., Travis, L. B. & 1 others, Eileen Dolan, M., Oct 1 2019, In : Clinical Cancer Research. 25, 19, p. 5913-5924 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

Cognitive effects of bilateral high frequency repetitive transcranial magnetic stimulation in early phase psychosis: a pilot study

Francis, M. M., Hummer, T. A., Vohs, J. L., Yung, M. G., Visco, A. C., Mehdiyoun, N. F., Kulig, T. C., Um, M., Yang, Z., Motamed, M., Liffick, E., Zhang, Y. & Breier, A., Jun 15 2019, In : Brain Imaging and Behavior. 13, 3, p. 852-861 10 p.

Research output: Contribution to journalArticle

6 Scopus citations
4 Scopus citations

Context-sensitive ecological momentary assessment: Application of user-centered design for improving user satisfaction and engagement during self-report

Srinivas, P., Bodke, K., Ofner, S., Keith, N. R., Tu, W. & Clark, D. O., Apr 2019, In : JMIR mHealth and uHealth. 7, 4, e10894.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Coping Among Breast Cancer Survivors: A Confirmatory Factor Analysis of the Brief COPE

Rand, K. L., Cohee, A. A., Monahan, P. O., Wagner, L. I., Shanahan, M. L. & Champion, V. L., Aug 1 2019, In : Journal of Nursing Measurement. 27, 2, p. 259-276 18 p.

Research output: Contribution to journalArticle

Critical care recovery center: A model of agile implementation in intensive care unit (icu) survivors

Wang, S., Hanneman, P., Xu, C., Gao, S., Allen, D., Golovyan, D., Kheir, Y. N., Fowler, N., Austrom, M., Khan, S., Boustani, M. & Khan, B., 2019, (Accepted/In press) In : International Psychogeriatrics.

Research output: Contribution to journalArticle

Deductive Semiparametric Estimation in Double-Sampling Designs with Application to PEPFAR

Qian, T., Frangakis, C. & Yiannoutsos, C., Jan 1 2019, (Accepted/In press) In : Statistics in Biosciences.

Research output: Contribution to journalArticle

Deprescribing in the Pharmacologic Management of Delirium: A Randomized Trial in the Intensive Care Unit

Campbell, N. L., Perkins, A. J., Khan, B. A., Gao, S., Farber, M. O., Khan, S., Wang, S. & Boustani, M. A., Apr 2019, In : Journal of the American Geriatrics Society. 67, 4, p. 695-702 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

Design and rationale of the B-lines lung ultrasound guided emergency department management of acute heart failure (BLUSHED-AHF) pilot trial

Russell, F. M., Ehrman, R. R., Ferre, R., Gargani, L., Noble, V., Rupp, J., Collins, S. P., Hunter, B., Lane, K. A., Levy, P., Li, X., O'Connor, C. & Pang, P. S., May 1 2019, In : Heart and Lung. 48, 3, p. 186-192 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

Detection of rectal chlamydia trachomatis in heterosexual men who report cunnilingus

Batteiger, T. A., Jordan, S. J., Toh, E., Fortenberry, L., Williams, J. A., Lapradd, M., Katz, B., Fortenberry, J. D., Dodge, B., Arno, J., Batteiger, B. E. & Nelson, D. E., Jul 1 2019, In : Sexually transmitted diseases. 46, 7, p. 440-445 6 p.

Research output: Contribution to journalArticle

5 Scopus citations

Development and Feasibility of SymTrak, aMulti-domain Tool for Monitoring Symptoms of Older Adults in Primary Care

Monahan, P. O., Kroenke, K., Callahan, C. M., Tamilyn, B., Harrawood, A., Lofton, P., Frye, D., Draucker, C., Stump, T., Saliba, D., Galvin, J. E., Keegan, A., Austrom, M. G. & Boustani, M., Jun 15 2019, In : Journal of general internal medicine. 34, 6, p. 915-922 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

Diagnosis and clinical outcomes of extrapulmonary tuberculosis in antiretroviral therapy programmes in low- and middle-income countries: a multicohort study

the International Epidemiology Databases to Evaluate AIDS (IeDEA) consortium, Sep 1 2019, In : Journal of the International AIDS Society. 22, 9, e25392.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Differentiating Between Walking and Stair Climbing Using Raw Accelerometry Data

Fadel, W. F., Urbanek, J. K., Albertson, S. R., Li, X., Chomistek, A. K. & Harezlak, J., Jul 15 2019, In : Statistics in Biosciences. 11, 2, p. 334-354 21 p.

Research output: Contribution to journalArticle

Distribution-free estimation of local growth rates around interval censored anchoring events

Chu, C., Zhang, Y. & Tu, W., 2019, In : Biometrics. 75, 2, p. 463-474 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

Drug-gene and drug-drug interactions associated with tramadol and codeine therapy in the INGENIOUS trial

Fulton, C. R., Zang, Y., Desta, Z., Rosenman, M. B., Holmes, A. M., Decker, B. S., Zhang, Y., T Callaghan, J., Pratt, V. M., Levy, K. D., Gufford, B. T., Dexter, P. R., Skaar, T. C. & Eadon, M. T., Apr 1 2019, In : Pharmacogenomics. 20, 6, p. 397-408 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

Effective fecal microbiota transplantation for recurrent Clostridioides difficile infection in humans is associated with increased signalling in the bile acid-farnesoid X receptor-fibroblast growth factor pathway

Monaghan, T., Mullish, B. H., Patterson, J., Wong, G. K. S., Marchesi, J. R., Xu, H., Jilani, T. & Kao, D., Mar 4 2019, In : Gut Microbes. 10, 2, p. 142-148 7 p.

Research output: Contribution to journalArticle

6 Scopus citations
Open Access

Effect on health care expenditures during nationwide implementation of the diabetes prevention program as a health insurance benefit

Ackermann, R. T., Kang, R., Cooper, A. J., Liss, D. T., Holmes, A. M., Moran, M. & Saha, C., Sep 1 2019, In : Diabetes care. 42, 9, p. 1776-1783 8 p.

Research output: Contribution to journalArticle

3 Scopus citations

Endothelial colony-forming cell function is reduced during HIV infection

Gupta, S. K., Liu, Z., Sims, E. C., Repass, M. J., Haneline, L. S. & Yoder, M. C., Jan 1 2019, In : Journal of Infectious Diseases. 219, 7, p. 1076-1083 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Erratum: stematic review and meta-analysis of individual participant data (Clin Epidemiol. 2018, 10, 363–379)

ICARA Study Group, Mar 1 2019, In : Clinical Epidemiology. 11, p. 229-230 2 p.

Research output: Contribution to journalComment/debate

Open Access

Evaluating the effect of data standardization and validation on patient matching accuracy

Grannis, S. J., Xu, H., Vest, J. R., Kasthurirathne, S., Bo, N., Moscovitch, B., Torkzadeh, R. & Rising, J., Mar 8 2019, In : Journal of the American Medical Informatics Association. 26, 5, p. 447-456 10 p.

Research output: Contribution to journalArticle

3 Scopus citations

Evaluation of a peer coach-led intervention to improve pain symptoms (ECLIPSE): Rationale, study design, methods, and sample characteristics

Matthias, M. S., Daggy, J., Adams, J., Menen, T., McCalley, S., Kukla, M., McGuire, A. B., Ofner, S., Pierce, E., Kempf, C., Heisler, M. & Bair, M. J., Jun 2019, In : Contemporary Clinical Trials. 81, p. 71-79 9 p.

Research output: Contribution to journalArticle

2 Scopus citations

Extending Achilles heel data quality tool with new rules informed by multi-site data quality comparison

Huser, V., Li, X., Zhang, Z., Jung, S., Park, R. W., Banda, J., Razzaghi, H., Londhe, A. & Natarajan, K., Aug 21 2019, MEDINFO 2019: Health and Wellbeing e-Networks for All - Proceedings of the 17th World Congress on Medical and Health Informatics. Seroussi, B., Ohno-Machado, L., Ohno-Machado, L. & Seroussi, B. (eds.). IOS Press, p. 1488-1489 2 p. (Studies in Health Technology and Informatics; vol. 264).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fecal microbiota transplantation for the treatment of recurrent and severe Clostridium difficile infection in solid organ transplant recipients: A multicenter experience

Cheng, Y. W., Phelps, E., Ganapini, V., Khan, N., Ouyang, F., Xu, H., Khanna, S., Tariq, R., Friedman-Moraco, R. J., Woodworth, M. H., Dhere, T., Kraft, C. S., Kao, D., Smith, J., Le, L., El-Nachef, N., Kaur, N., Kowsika, S., Ehrlich, A., Smith, M. & 8 others, Safdar, N., Misch, E. A., Allegretti, J. R., Flynn, A., Kassam, Z., Sharfuddin, A., Vuppalanchi, R. & Fischer, M., Feb 1 2019, In : American Journal of Transplantation. 19, 2, p. 501-511 11 p.

Research output: Contribution to journalArticle

16 Scopus citations

GCH1 haplotypes and cardiovascular risk in HIV

Slaven, J. E., Haas, D. W., Liu, Z., Stein, J. H., Brown, T. T. & Gupta, S. K., Aug 1 2019, In : AIDS. 33, 10, p. 1669-1671 3 p.

Research output: Contribution to journalArticle

Global variations in mortality in adults after initiating antiretroviral treatment: An updated analysis of the International epidemiology Databases to Evaluate AIDS cohort collaboration

Johnson, L. F., Anderegg, N., Zaniewski, E., Eaton, J. W., Rebeiro, P. F., Carriquiry, G., Nash, D., Yotebieng, M., Ekouevi, D. K., Holmes, C. B., Choi, J. Y., Jiamsakul, A., Bakoyannis, G., Althoff, K. N., Sohn, A. H., Yiannoutsos, C. & Egger, M., Dec 15 2019, In : AIDS. 33, p. S283-S294

Research output: Contribution to journalArticle

2 Scopus citations

Growth of young HIV-infected and HIV-exposed children in western Kenya: A retrospective chart review

McHenry, M. S., Apondi, E., Ayaya, S. O., Yang, Z., Li, W., Tu, W., Bi, G., Sang, E. & Vreeman, R. C., Dec 1 2019, In : PloS one. 14, 12, e0224295.

Research output: Contribution to journalArticle

Open Access

HIV Risk and Prevention Outcomes in a Probability-Based Sample of Gay and Bisexual Men in the United States

Dodge, B., Ford, J. V., Bo, N., Tu, W., Pachankis, J., Herbenick, D., Mayer, K. & Hatzenbuehler, M. L., Dec 1 2019, In : Journal of acquired immune deficiency syndromes (1999). 82, 4, p. 355-361 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

Hyperparathyroidism and parathyroidectomy in X-linked hypophosphatemia patients

DeLacey, S., Liu, Z., Broyles, A., El-Azab, S. A., Guandique, C. F., James, B. C. & Imel, E. A., Oct 2019, In : Bone. 127, p. 386-392 7 p.

Research output: Contribution to journalArticle

3 Scopus citations
1 Scopus citations
Open Access
4 Scopus citations
Open Access

Incidence of Dementia and Alzheimer Disease Over Time: A Meta-Analysis

Gao, S., Burney, H. N., Callahan, C. M., Purnell, C. E. & Hendrie, H. C., Jan 1 2019, In : Journal of the American Geriatrics Society.

Research output: Contribution to journalArticle

3 Scopus citations
Open Access
1 Scopus citations

Interferon Gamma-1b Does Not Increase Markers of Bone Resorption in Autosomal Dominant Osteopetrosis

Imel, E. A., Liu, Z., Acton, D., Coffman, M., Gebregziabher, N., Tong, Y. & Econs, M. J., 2019, In : Journal of Bone and Mineral Research. 34, 8, p. 1436-1445 10 p.

Research output: Contribution to journalArticle

3 Scopus citations

Large-sample estimation and inference in multivariate single-index models

Wu, J., Peng, H. & Tu, W., May 2019, In : Journal of Multivariate Analysis. 171, p. 382-396 15 p.

Research output: Contribution to journalArticle

Lessons and Outcomes of Mobile Acute Care for Elders Consultation in a Veterans Affairs Medical Center

Schubert, C. C., Parks, R., Coffing, J. M., Daggy, J., Slaven, J. E. & Weiner, M., Apr 2019, In : Journal of the American Geriatrics Society. 67, 4, p. 818-824 7 p.

Research output: Contribution to journalArticle

Loss of function of NCOR1 and NCOR2 impairs memory through a novel GABAergic hypothalamus–CA3 projection

DDD study, Feb 1 2019, In : Nature Neuroscience. 22, 2, p. 205-217 13 p.

Research output: Contribution to journalArticle

13 Scopus citations

LTMG: a novel statistical modeling of transcriptional expression states in single-cell RNA-Seq data

Wan, C., Chang, W., Zhang, Y., Shah, F., Lu, X., Zang, Y., Zhang, A., Cao, S., Fishel, M. L., Ma, Q. & Zhang, C., Oct 10 2019, In : Nucleic acids research. 47, 18, p. e111

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

M3S: A comprehensive model selection for multi-modal single-cell RNA sequencing data

Zhang, Y., Wan, C., Wang, P., Chang, W., Huo, Y., Chen, J., Ma, Q., Cao, S. & Zhang, C., Dec 20 2019, In : BMC bioinformatics. 20, 672.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Medicaid Coverage and Continuity for Juvenile Justice–Involved Youth

Anderson, V. R., Ouyang, F., Tu, W., Rosenman, M. B., Wiehe, S. E. & Aalsma, M. C., Jan 1 2019, In : Journal of Correctional Health Care. 25, 1, p. 45-54 10 p.

Research output: Contribution to journalArticle

2 Scopus citations

MIND food and speed of processing training in older adults with low education, the MINDSpeed Alzheimer's disease prevention pilot trial

Clark, D. O., Xu, H., Moser, L., Adeoye, P., Lin, A. W., Tangney, C. C., Risacher, S. L., Saykin, A. J., Considine, R. V. & Unverzagt, F. W., Sep 2019, In : Contemporary Clinical Trials. 84, 105814.

Research output: Contribution to journalArticle

Nonparametric inference for markov processes with missing absorbing state

Bakoyannis, G., Zhang, Y. & Yiannoutsos, C. T., 2019, In : Statistica Sinica. 29, 4, p. 2083-2104 22 p.

Research output: Contribution to journalArticle

Performance characteristics of fecal immunochemical tests for colorectal cancer and advanced adenomatous polyps: A systematic review and meta-analysis

Imperiale, T. F., Gruber, R. N., Stump, T. E., Emmett, T. W. & Monahan, P. O., Jan 1 2019, In : Annals of internal medicine. 170, 5, p. 319-329 11 p.

Research output: Contribution to journalReview article

23 Scopus citations