A. Dunker

  • 30972 Citations
  • 84 h-Index
1969 …2020

Research output per year

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Publications

2002

Crystallization and structure-function of calsequestrin.

Kang, C. H., Trumble, W. R. & Dunker, A. K., 2002, In : Methods in molecular biology (Clifton, N.J.). 172, p. 281-294 14 p.

Research output: Contribution to journalArticle

4 Scopus citations

Evolutionary rate heterogeneity in proteins with long disordered regions

Brown, C. J., Takayama, S., Campen, A. M., Vise, P., Marshall, T. W., Oldfield, C. J., Williams, C. J. & Keith Dunker, A., Jun 25 2002, In : Journal of Molecular Evolution. 55, 1, p. 104-110 7 p.

Research output: Contribution to journalArticle

299 Scopus citations

Hydrophobic probe binding of β-lactoglobulin in the native and molten globule state induced by high pressure as affected by pH, KIO3 and N-ethylmaleimide

Yang, J., Powers, J. R., Clark, S., Dunker, A. K. & Swanson, B. G., Aug 28 2002, In : Journal of Agricultural and Food Chemistry. 50, 18, p. 5207-5214 8 p.

Research output: Contribution to journalArticle

27 Scopus citations

Identification and functions of usefully disordered proteins

Dunker, A. K., Brown, C. J. & Obradovic, Z., Jan 1 2002, In : Advances in Protein Chemistry. 62, p. 25-49 25 p.

Research output: Contribution to journalReview article

301 Scopus citations

Improving sequence alignments for intrinsically disordered proteins.

Radivojac, P., Obradovic, Z., Brown, C. J. & Dunker, A. K., 2002, In : Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 589-600 12 p.

Research output: Contribution to journalArticle

24 Scopus citations

Intrinsic disorder and protein function

Dunker, A. K., Brown, C. J., Lawson, J. D., Iakoucheva, L. M. & Obradović, Z., May 28 2002, In : Biochemistry. 41, 21, p. 6573-6582 10 p.

Research output: Contribution to journalArticle

1316 Scopus citations

Intrinsic disorder in cell-signaling and cancer-associated proteins

Iakoucheva, L. M., Brown, C. J., Lawson, J. D., Obradović, Z. & Dunker, A. K., Jan 1 2002, In : Journal of molecular biology. 323, 3, p. 573-584 12 p.

Research output: Contribution to journalArticle

840 Scopus citations

The benefit of intrinsic disorder information in neural network prediction of calmodulin binding targets

O'Connor, T. R., Lawson, J. D. & Dunker, A. K., Jan 1 2002, p. 296-299. 4 p.

Research output: Contribution to conferencePaper

1 Scopus citations

The protein trinity: Importance of intrinsic disorder for protein function

Dunker, K., Jan 1 2002, In : Human Genome News. 12, 1, p. 13-14 2 p.

Research output: Contribution to journalShort survey

3 Scopus citations
2001

Aberrant mobility phenomena of the DNA repair protein XPA

Iakoucheva, L. M., Kimzey, A. L., Masselon, C. D., Smith, R. D., Dunker, A. K. & Ackerman, E. J., Jul 4 2001, In : Protein Science. 10, 7, p. 1353-1362 10 p.

Research output: Contribution to journalArticle

96 Scopus citations

Clusterin, a binding protein with a molten globule-like region

Bailey, R. W., Dunker, A. K., Brown, C. J., Garner, E. C. & Griswold, M. D., Oct 2 2001, In : Biochemistry. 40, 39, p. 11828-11840 13 p.

Research output: Contribution to journalArticle

78 Scopus citations

Identification of intrinsic order and disorder in the DNA repair protein XPA

Iakoucheva, L. M., Kimzey, A. L., Masselon, C. D., Bruce, J. E., Garner, E. C., Brown, C. J., Dunker, A. K., Smith, R. D. & Ackerman, E. J., Mar 28 2001, In : Protein Science. 10, 3, p. 560-571 12 p.

Research output: Contribution to journalArticle

88 Scopus citations

Intrinsically disordered protein

Dunker, A. K., Lawson, J. D., Brown, C. J., Williams, R. M., Romero, P., Oh, J. S., Oldfield, C. J., Campen, A. M., Ratliff, C. M., Hipps, K. W., Ausio, J., Nissen, M. S., Reeves, R., Kang, C. H., Kissinger, C. R., Bailey, R. W., Griswold, M. D., Chiu, W., Garner, E. C. & Obradovic, Z., May 17 2001, In : Journal of Molecular Graphics and Modelling. 19, 1, p. 26-59 34 p.

Research output: Contribution to journalArticle

1532 Scopus citations

Methods for improving protein disorder prediction

Vucetic, S., Radivojac, P., Obradovic, Z., Brown, C. J. & Dunker, A. K., Jan 1 2001, p. 2718-2723. 6 p.

Research output: Contribution to conferencePaper

14 Scopus citations

Sequence complexity of disordered protein

Romero, P., Obradovic, Z., Li, X., Garner, E. C., Brown, C. J. & Dunker, A. K., Jan 11 2001, In : Proteins: Structure, Function and Genetics. 42, 1, p. 38-48 11 p.

Research output: Contribution to journalArticle

1090 Scopus citations

The power to detect recombination using the coalescent [3]

Brown, C. J., Garner, E. C., Dunker, A. K. & Joyce, P., Jan 1 2001, In : Molecular Biology and Evolution. 18, 7, p. 1421-1424 4 p.

Research output: Contribution to journalLetter

23 Scopus citations

The protein non-folding problem: amino acid determinants of intrinsic order and disorder.

Williams, R. M., Obradovi, Z., Mathura, V., Braun, W., Garner, E. C., Young, J., Takayama, S., Brown, C. J. & Dunker, A. K., 2001, In : Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 89-100 12 p.

Research output: Contribution to journalArticle

150 Scopus citations

The protein trinity - Linking function and disorder

Dunker, A. K. & Obradovic, Z., Sep 15 2001, In : Nature Biotechnology. 19, 9, p. 805-806 2 p.

Research output: Contribution to journalComment/debate

446 Scopus citations

β-Lactoglobulin molten globule induced by high pressure

Yang, J., Dunker, A. K., Powers, J. R., Clark, S. & Swanson, B. G., Sep 26 2001, In : Journal of Agricultural and Food Chemistry. 49, 7, p. 3236-3243 8 p.

Research output: Contribution to journalArticle

76 Scopus citations
2000

Comparing predictors of disordered protein.

Li, X., Obradovic, Z., Brown, C. J., Garner, E. C. & Dunker, A. K., 2000, In : Genome informatics. Workshop on Genome Informatics. 11, p. 172-184 13 p.

Research output: Contribution to journalArticle

34 Scopus citations

Intelligent data analysis for protein disorder prediction

Romero, P., Obradovic, Z. & Dunker, A. K., Dec 1 2000, In : Artificial Intelligence Review. 14, 6, p. 447-484 38 p.

Research output: Contribution to journalArticle

29 Scopus citations

Intrinsic protein disorder in complete genomes.

Dunker, A. K., Obradovic, Z., Romero, P., Garner, E. C. & Brown, C. J., 2000, In : Genome informatics. Workshop on Genome Informatics. 11, p. 161-171 11 p.

Research output: Contribution to journalArticle

540 Scopus citations

Isolation and characterization of cDNAs expressed in the early stages of flavonol-induced pollen germination in petunia

Guyon, V. N., Astwood, J. D., Garner, E. C., Dunker, A. K. & Taylor, L. P., Jan 1 2000, In : Plant Physiology. 123, 2, p. 699-710 12 p.

Research output: Contribution to journalArticle

Open Access
65 Scopus citations
1999

Folding minimal sequences: The lower bound for sequence complexity of globular proteins

Romero, P., Obradovic, Z. & Dunker, A. K., Dec 3 1999, In : FEBS Letters. 462, 3, p. 363-367 5 p.

Research output: Contribution to journalArticle

64 Scopus citations

Isolation of chloroform-resistant mutants of filamentous phage: Localization in models of phage structure

Oh, J. S., Davies, D. R., Lawson, J. D., Arnold, G. E. & Dunker, A. K., Apr 2 1999, In : Journal of molecular biology. 287, 3, p. 449-457 9 p.

Research output: Contribution to journalArticle

11 Scopus citations
1998

Crystal structure of calsequestrin from rabbit skeletal muscle sarcoplasmic reticulum

Wang, S., Trumble, W. R., Liao, H., Wesson, C. R., Dunker, A. K. & Kang, C. H., Jun 1 1998, In : Nature Structural Biology. 5, 6, p. 476-483 8 p.

Research output: Contribution to journalArticle

186 Scopus citations

Effects of relative humidity and applied force on atomic force microscopy images of the filamentous phage fd

Ji, X., Oh, J., Dunker, A. K. & Hipps, K. W., May 1 1998, In : Ultramicroscopy. 72, 3-4, p. 165-176 12 p.

Research output: Contribution to journalArticle

21 Scopus citations

Protein disorder and the evolution of molecular recognition: theory, predictions and observations.

Dunker, A. K., Garner, E., Guilliot, S., Romero, P., Albrecht, K., Hart, J., Obradovic, Z., Kissinger, C. & Villafranca, J. E., 1998, In : Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 473-484 12 p.

Research output: Contribution to journalArticle

312 Scopus citations

Thousands of proteins likely to have long disordered regions.

Romero, P., Obradovic, Z., Kissinger, C. R., Villafranca, J. E., Garner, E., Guilliot, S. & Dunker, A. K., 1998, In : Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 437-448 12 p.

Research output: Contribution to journalArticle

207 Scopus citations
1997

Identifying disordered regions in proteins from amino acid sequence

Romero, P., Obradovic, Z., Kissinger, C., Villafranca, J. E. & Dunker, A. K., Dec 1 1997, 1997 IEEE International Conference on Neural Networks, ICNN 1997. p. 90-95 6 p. 611643. (IEEE International Conference on Neural Networks - Conference Proceedings; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

209 Scopus citations
1996
4 Scopus citations

Relation of β-lactoglobulin - Sodium polypectate aggregation to bulk macromolecular concentration

Ndi, E. E., Swanson, B. G., Dunker, A. K. & Luedecke, L. O., Jan 1 1996, In : Journal of Food Science. 61, 1, p. 69-73 5 p.

Research output: Contribution to journalArticle

6 Scopus citations
1995

Identifying repeated structural elements in folded proteins

Miller, R. T., Douthart, R. J. & Dunker, A. K., Jan 1 1995, Proceedings of the Hawaii International Conference on System Sciences. Nunamaker, J. F. & Sprague, R. H. J. (eds.). Publ by IEEE, p. 235-244 10 p. (Proceedings of the Hawaii International Conference on System Sciences; vol. 5).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Protein structure prediction. Introduction to session

Dunker, A. K. & Lathrop, R. H., Jan 1 1995, Proceedings of the Hawaii International Conference on System Sciences. Nunamaker, J. F. & Sprague, R. H. J. (eds.). Publ by IEEE, 1 p. (Proceedings of the Hawaii International Conference on System Sciences; vol. 5).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1994

Evidence that the A2 fragment of Shiga-like toxin type I is required for holotoxin integrity

Austin, P. R., Jablonski, P. E., Bohach, G. A., Dunker, A. K. & Hovde, C. J., Jan 1 1994, In : Infection and immunity. 62, 5, p. 1768-1775 8 p.

Research output: Contribution to journalArticle

16 Scopus citations

P22 phage capsids under pressure.

Dunker, A. K., May 1994, In : Biophysical journal. 66, 5, p. 1269-1271 3 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations
1993

An alphabet of amino acid conformations in protein

Miller, R. T., Douthart, R. J. & Dunker, A. K., Jan 1 1993, Proceedings of the 26th Hawaii International Conference on System Sciences, HICSS 1993. IEEE Computer Society, p. 689-698 10 p. 270672. (Proceedings of the Annual Hawaii International Conference on System Sciences; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Atomic force microscopy of DNA and bacteriophage in air, water and propanol: The role of adhesion forces

Lyubchenko, Y. L., Oden, P. I., Lampner, D., Lindsay, S. M. & Dunker, K. A., Mar 11 1993, In : Nucleic acids research. 21, 5, p. 1117-1123 7 p.

Research output: Contribution to journalArticle

149 Scopus citations

Ca2+-induced folding and aggregation of skeletal muscle sarcoplasmic reticulum calsequestrin. The involvement of the trifluoperazine-binding site

He, Z., Dunker, A. K., Wesson, C. R. & Trumble, W. R., Jan 1 1993, In : Journal of Biological Chemistry. 268, 33, p. 24635-24641 7 p.

Research output: Contribution to journalArticle

55 Scopus citations

Structural Changes Accompanying Chloroform-Induced Contraction of the Filamentous Phage fd

Roberts, L. M. & Dunker, A. K., Jan 1 1993, In : Biochemistry. 32, 39, p. 10479-10488 10 p.

Research output: Contribution to journalArticle

27 Scopus citations
1992

Tryptophan Contributions to the Unusual Circular Dichroism of fd Bacteriophage

Arnold, G. E., Day, L. A. & Keith Dunker, A., Feb 1 1992, In : Biochemistry. 31, 34, p. 7948-7956 9 p.

Research output: Contribution to journalArticle

76 Scopus citations

Use of conditional probabilities for determining relationships between amino acid sequence and protein secondary structure

Arnold, G. E., Dunker, A. K., Johns, S. J. & Douthart, R. J., Apr 1992, In : Proteins: Structure, Function, and Bioinformatics. 12, 4, p. 382-399 18 p.

Research output: Contribution to journalArticle

15 Scopus citations
1991

A model for fd phage penetration and assembly

Dunker, A. K., Ensign, L. D., Arnold, G. E. & Roberts, L. M., Nov 4 1991, In : FEBS Letters. 292, 1-2, p. 271-274 4 p.

Research output: Contribution to journalArticle

25 Scopus citations

Proposed molten globule intermediates in fd phage penetration and assembly

Dunker, A. K., Ensign, L. D., Arnold, G. E. & Roberts, L. M., Nov 4 1991, In : FEBS Letters. 292, 1-2, p. 275-278 4 p.

Research output: Contribution to journalArticle

28 Scopus citations
1990

The effect of donor-acceptor interactions on the mechanical properties of wood

Ma, D., Johns, W. E., Bayoumi, A. E. & Keith Dunker, A., Jan 1 1990, In : Journal of Adhesion Science and Technology. 4, 1, p. 411-429 19 p.

Research output: Contribution to journalArticle

10 Scopus citations
1987

Characterization of hepatic carnitine palmitoyltransferase. Use of bromoacyl derivatives and antibodies

Brady, P. S., Dunker, A. K. & Brady, L. J., Jan 1 1987, In : Biochemical Journal. 241, 3, p. 751-757 7 p.

Research output: Contribution to journalArticle

6 Scopus citations

Comparison of Lipid/Gramicidin Dispersions and Cocrystals by Raman Scattering

Short, K. W., Wallace, B. A., Myers, R. A., Fodor, S. P. & Dunker, A. K., Jan 1 1987, In : Biochemistry. 26, 2, p. 557-562 6 p.

Research output: Contribution to journalArticle

19 Scopus citations

Interaction of Synthetic Proanthocyanidin Dimer and Trimer with Bovine Serum Albumin and Purified Bean Globulin Fraction G-l

Artz, W. E., Bishop, P. D., Dunker, A. K., Schanus, E. G. & Swanson, B. G., May 1 1987, In : Journal of Agricultural and Food Chemistry. 35, 3, p. 417-421 5 p.

Research output: Contribution to journalArticle

68 Scopus citations

Limited nucleosome migration can completely randomize DNA repair patches in intact human cells

Arnold, G. E., Dunker, A. K. & Smerdon, M. J., Jul 20 1987, In : Journal of molecular biology. 196, 2, p. 433-436 4 p.

Research output: Contribution to journalArticle

6 Scopus citations