Kenneth Dunn

  • 4704 Citations
  • 36 h-Index
1988 …2020
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Publications 1988 2019

  • 4704 Citations
  • 36 h-Index
  • 88 Article
  • 17 Conference contribution
  • 1 Conference article
  • 1 Editorial
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Article
2010
47 Citations (Scopus)
Cilia
Epithelial Cells
Kidney
Epithelium
Fungal Proteins
40 Citations (Scopus)

Two-photon intravital imaging of thrombus development

Kamocka, M., Mu, J., Liu, X., Chen, N., Zollman, A., Sturonas-Brown, B., Dunn, K., Xu, Z., Chen, D. Z., Alber, M. S. & Rosen, E., 2010, In : Journal of Biomedical Optics. 15, 1, 016020.

Research output: Contribution to journalArticle

blood cells
Blood
Photons
platelets
fibrin
2011
663 Citations (Scopus)

A practical guide to evaluating colocalization in biological microscopy

Dunn, K., Kamocka, M. & McDonald, J. H., Apr 2011, In : American Journal of Physiology - Cell Physiology. 300, 4

Research output: Contribution to journalArticle

Fluorescence Microscopy
Microscopy
Cell Biology
Biomedical Research
Software
11 Citations (Scopus)

Deep tissue fluorescent imaging in scattering specimens using confocal microscopy

Clendenon, S. G., Young, P. A., Ferkowicz, M., Phillips, C. & Dunn, K., Aug 2011, In : Microscopy and Microanalysis. 17, 4, p. 614-617 4 p.

Research output: Contribution to journalArticle

clearing
Confocal microscopy
Scattering
Tissue
microscopy
75 Citations (Scopus)

Endotoxin uptake by S1 proximal tubular segment causes oxidative stress in the downstream S2 segment

Kalakeche, R., Hato, T., Rhodes, G., Dunn, K., Ashkar (El-Achkar), T., Plotkin, Z., Sandoval, R. M. & Dagher, P., 2011, In : Journal of the American Society of Nephrology. 22, 8, p. 1505-1516 12 p.

Research output: Contribution to journalArticle

Endotoxins
Oxidative Stress
Sirtuin 1
Acute Kidney Injury
Sepsis
11 Citations (Scopus)

The effects of refractive index heterogeneity within kidney tissue on multiphoton fluorescence excitation microscopy

Young, P. A., Clendenon, S. G., Byars, J. M. & Dunn, K., May 2011, In : Journal of Microscopy. 242, 2, p. 148-156 9 p.

Research output: Contribution to journalArticle

Multiphoton Fluorescence Microscopy
Refractometry
Kidney
Fluorescence
13 Citations (Scopus)

The effects of spherical aberration on multiphoton fluorescence excitation microscopy

Young, P. A., Clendenon, S. G., Byars, J. M., Decca, R. S. & Dunn, K., May 2011, In : Journal of Microscopy. 242, 2, p. 157-165 9 p.

Research output: Contribution to journalArticle

Multiphoton Fluorescence Microscopy
Refractometry
Fluorescence
Photobleaching
Immersion
36 Citations (Scopus)

Two-photon imaging within the murine thorax without respiratory and cardiac motion artifact

Presson, R., Brown, M. B., Fisher, A. J., Sandoval, R. M., Dunn, K., Lorenz, K. S., Delp, E. J., Salama, P., Molitoris, B. & Petrache, I., Jul 2011, In : American Journal of Pathology. 179, 1, p. 75-82 8 p.

Research output: Contribution to journalArticle

Photons
Artifacts
Thorax
Microscopy
Leukocytes
2012
10 Citations (Scopus)

Digital correction of motion artefacts in microscopy image sequences collected from living animals using rigid and nonrigid registration

Lorenz, K. S., Salama, P., Dunn, K. & Delp, E. J., Feb 2012, In : Journal of Microscopy. 245, 2, p. 148-160 13 p.

Research output: Contribution to journalArticle

Artifacts
Microscopy
Salivary Glands
Rodentia
Kidney
21 Citations (Scopus)

Effects of IFN-γ on intracellular trafficking and activity of macrophage NADPH oxidase flavocytochrome b558

Casbon, A. J., Long, M. E., Dunn, K., Allen, L. A. H. & Dinauer, M. C., Oct 2012, In : Journal of Leukocyte Biology. 92, 4, p. 869-882 14 p.

Research output: Contribution to journalArticle

NADPH Oxidase
Macrophages
Intracellular Membranes
Endosomes
Phagocytes

Functional studies in living animals using multiphoton microscopy

Dunn, K. & Sutton, T., 2012, In : ILAR Journal. 53, 1, p. 66-77 12 p.

Research output: Contribution to journalArticle

Microscopy
microscopy
Physiology
Microscopic examination
Animals
12 Citations (Scopus)
Microscopy
Microscopic examination
Animals
Kidney
Fluorescent Dyes
2013
1 Citation (Scopus)

High resolution 4-dimension imaging of metanephric embryonic kidney morphogenesis

Clendenon, S. G., Ward, H. H., Dunn, K. & Bacallao, R., Apr 2013, In : Kidney International. 83, 4, p. 757-761 5 p.

Research output: Contribution to journalArticle

Organ Culture Techniques
Morphogenesis
Kidney
Multiphoton Fluorescence Microscopy
Three-Dimensional Imaging
52 Citations (Scopus)

Statistical tests for measures of colocalization in biological microscopy

Mcdonald, J. H. & Dunn, K., Dec 2013, In : Journal of Microscopy. 252, 3, p. 295-302 8 p.

Research output: Contribution to journalArticle

Microscopy
Students
Statistical Data Interpretation
Spatial Analysis
Random Allocation
2014
40 Citations (Scopus)

Diversity of two forms of DNA methylation in the brain

Chen, Y., Damayanti, N. P., Irudayaraj, J., Dunn, K. & Zhou, F., 2014, In : Frontiers in Genetics. 5, MAR, Article 46.

Research output: Contribution to journalArticle

5-Methylcytosine
DNA Methylation
Brain
Chromatin
Neural Stem Cells
15 Citations (Scopus)
Fluorescein
Chronic Renal Insufficiency
Liver
Hepatocytes
Nephrectomy
2015
12 Citations (Scopus)

A practical method for monitoring FRET-based biosensors in living animals using two-photon microscopy

Tao, W., Rubart-von der Lohe, M., Ryan, J., Xiao, X., Qiao, C., Hato, T., Davidson, M. W., Dunn, K. & Day, R., 2015, In : American Journal of Physiology - Cell Physiology. 309, 11, p. C724-C735

Research output: Contribution to journalArticle

Energy Transfer
Biosensing Techniques
Photons
Microscopy
Cyclic AMP-Dependent Protein Kinases

Correction: RhoB-dependent modulation of early endocytic traffic in Madin-Darby canine kidney cells (Journal of Biological Chemistry (2004))

Rojas, R., Ruiz, W. G., Wang, E., Kinlough, C. L., Poland, P. A., Hughey, R. P., Dunn, K. & Apodaca, G., Aug 7 2015, In : Journal of Biological Chemistry. 290, 32, p. 19542 1 p.

Research output: Contribution to journalArticle

Telecommunication traffic
Modulation
2016
13 Citations (Scopus)

A simple approach for measuring FRET in fluorescent biosensors using two-photon microscopy

Day, R., Tao, W. & Dunn, K., Nov 1 2016, In : Nature Protocols. 11, 11, p. 2066-2080 15 p.

Research output: Contribution to journalArticle

Energy Transfer
Biosensing Techniques
Photons
Biosensors
Energy transfer
2 Citations (Scopus)

Gene targets of mouse miR-709: Regulation of distinct pools

Surendran, S., Jideonwo, V. N., Merchun, C., Ahn, M., Murray, J., Ryan, J., Dunn, K., Kota, J. & Morral, N., Jan 8 2016, In : Scientific Reports. 6, 18958.

Research output: Contribution to journalArticle

MicroRNAs
Cytoskeleton
Genes
Hepatocytes
Gene Pool
2017
2 Citations (Scopus)

Kinetic analyses of vasculogenesis inform mechanistic studies

Varberg, K. M., Winfree, S., Chu, C., Tu, W., Blue, E. K., Gohn, C. R., Dunn, K. & Haneline, L., Apr 7 2017, In : American Journal of Physiology - Cell Physiology. 312, 4, p. C446-C458

Research output: Contribution to journalArticle

Diabetes Mellitus
Fiji
Maternal Exposure
Cell Movement
Stem Cells
3 Citations (Scopus)

Large-scale 3-dimensional quantitative imaging of tissues: State-of-the-art and translational implications

Winfree, S., Ferkowicz, M. J., Dagher, P., Kelly, K., Eadon, M., Sutton, T., Markel, T. A., Yoder, M., Dunn, K. & Ashkar (El-Achkar), T., 2017, (Accepted/In press) In : Translational Research.

Research output: Contribution to journalArticle

Tissue
Imaging techniques
Research Personnel
Technology
Precision Medicine
10 Citations (Scopus)

Quantitative three-dimensional tissue cytometry to study kidney tissue and resident immune cells

Winfree, S., Khan, S., Micanovic, R., Eadon, M., Kelly, K., Sutton, T., Phillips, C., Dunn, K. & Ashkar (El-Achkar), T., Jul 1 2017, In : Journal of the American Society of Nephrology. 28, 7, p. 2108-2118 11 p.

Research output: Contribution to journalArticle

Kidney
Flow Cytometry
Software
Biopsy
Spatial Analysis
24 Citations (Scopus)

Two-photon intravital fluorescence lifetime imaging of the kidney reveals cell-type specific metabolic signatures

Hato, T., Winfree, S., Day, R., Sandoval, R. M., Molitoris, B., Yoder, M., Wiggins, R. C., Zheng, Y., Dunn, K. & Dagher, P., Aug 1 2017, In : Journal of the American Society of Nephrology. 28, 8, p. 2420-2430 11 p.

Research output: Contribution to journalArticle

Optical Imaging
Photons
Microscopy
Kidney
Metabolome
4 Citations (Scopus)

Using quantitative intravital multiphoton microscopy to dissect hepatic transport in rats

Dunn, K. & Ryan, J. C., Feb 1 2017, (Accepted/In press) In : Methods.

Research output: Contribution to journalArticle

Liver
Rats
Microscopic examination
Solute transport
Fluorescence microscopy
2018
2 Citations (Scopus)

Intravital multiphoton microscopy with fluorescent bile salts in rats as an in vivo biomarker for hepatobiliary transport inhibition

Ryan, J., Morgan, R. E., Chen, Y., Volak, L. P., Dunn, R. T. & Dunn, K., May 1 2018, In : Drug Metabolism and Disposition. 46, 5, p. 704-718 15 p.

Research output: Contribution to journalArticle

Bile Acids and Salts
Biomarkers
Intravital Microscopy
Pharmaceutical Preparations
Chemical and Drug Induced Liver Injury
3 Citations (Scopus)

Kinetic analysis of vasculogenesis quantifies dynamics of vasculogenesis and angiogenesis in vitro

Varberg, K. M., Winfree, S., Dunn, K. & Haneline, L., Jan 31 2018, In : Journal of Visualized Experiments. 2018, 131, e57044.

Research output: Contribution to journalArticle

Medical problems
Kinetics
Network components
Diabetes Mellitus
Endothelial cells
3 Citations (Scopus)

Live-Animal Imaging of Renal Function by Multiphoton Microscopy

Dunn, K., Sutton, T. & Sandoval, R. M., Jan 18 2018, In : Current Protocols in Cytometry. 83, p. 12.9.1-12.9.25

Research output: Contribution to journalArticle

Microscopy
Microscopic examination
Animals
Kidney
Fluorescent Dyes
4 Citations (Scopus)

Modeling of xenobiotic transport and metabolism in virtual hepatic lobule models

Fu, X., Sluka, J. P., Clendenon, S. G., Dunn, K., Wang, Z., Klaunig, J. E. & Glazier, J. A., Sep 1 2018, In : PLoS One. 13, 9, e0198060.

Research output: Contribution to journalArticle

Xenobiotics
xenobiotics
Metabolism
Liver
liver
1 Citation (Scopus)

Quantitative Large-Scale Three-Dimensional Imaging of Human Kidney Biopsies: A Bridge to Precision Medicine in Kidney Disease

Winfree, S., Dagher, P., Dunn, K., Eadon, M., Ferkowicz, M., Barwinska, D., Kelly, K., Sutton, T. & Ashkar (El-Achkar), T., Jun 5 2018, (Accepted/In press) In : Nephron. p. 1-6 6 p.

Research output: Contribution to journalArticle

Precision Medicine
Three-Dimensional Imaging
Kidney Diseases
Kidney
Biopsy

Segmentation of biological images containing multitarget labeling using the jelly filling framework

Gadgil, N. J., Salama, P., Dunn, K. & Delp, E. J., Oct 1 2018, In : Journal of Medical Imaging. 5, 4, 044006.

Research output: Contribution to journalArticle

Three-Dimensional Imaging
Fluorescence Microscopy
Artifacts
1 Citation (Scopus)

Skeletal accumulation of fluorescently tagged zoledronate is higher in animals with early stage chronic kidney disease

Swallow, E. A., Aref, M. W., Chen, X. N., Byiringiro, I., Hammond, M. A., McCarthy, B. P., Territo, P., Kamocka, M., Winfree, S., Dunn, K., Moe, S. & Allen, M., Jun 11 2018, (Accepted/In press) In : Osteoporosis International. p. 1-8 8 p.

Research output: Contribution to journalArticle

zoledronic acid
Chronic Renal Insufficiency
Tibia
Kidney
Bone and Bones
2019

A simple automated method for continuous fieldwise measurement of microvascular hemodynamics

Clendenon, S. G., Fu, X., Von Hoene, R. A., Clendenon, J. L., Sluka, J. P., Winfree, S., Mang, H., Martinez, M., Filson, A. J., Klaunig, J. E., Glazier, J. A. & Dunn, K., May 1 2019, In : Microvascular Research. 123, p. 7-13 7 p.

Research output: Contribution to journalArticle

Spatio-Temporal Analysis
Hemodynamics
Motion Pictures
Blood Vessels
Spreadsheets

Automatic segmentation of intravital fluorescence microscopy images by K-means clustering of FLIM phasors

Zhang, Y., Hato, T., Dagher, P., Nichols, E. L., Smith, C. J., Dunn, K. & Howard, S. S., Aug 15 2019, In : Optics Letters. 44, 16, p. 3928-3931 4 p.

Research output: Contribution to journalArticle

microscopy
life (durability)
fluorescence
marking
machine learning
1 Citation (Scopus)

A Versatile, Portable Intravital Microscopy Platform for Studying Beta-cell Biology In Vivo

Reissaus, C. A., Piñeros, A. R., Twigg, A. N., Orr, K. S., Conteh, A. M., Martinez, M. M., Kamocka, M., Day, R., Tersey, S. A., Mirmira, R., Dunn, K. & Linnemann, A., Dec 1 2019, In : Scientific Reports. 9, 1, 8449.

Research output: Contribution to journalArticle

Open Access
Biosensing Techniques
Cell Biology
Cell Physiological Phenomena
Aptitude
Calcium Signaling

DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data

Dunn, K. W., Fu, C., Ho, D. J., Lee, S., Han, S., Salama, P. & Delp, E. J., Dec 1 2019, In : Scientific reports. 9, 1, 18295.

Research output: Contribution to journalArticle

Open Access
Learning
Three-Dimensional Imaging
Workflow
Microscopy
Fluorescence

Quantitative Kinetic Models from Intravital Microscopy: A Case Study Using Hepatic Transport

Tavakoli, M., Tsekouras, K., Day, R., Dunn, K. W. & Pressé, S., Jan 1 2019, (Accepted/In press) In : Journal of Physical Chemistry B.

Research output: Contribution to journalArticle

liver
Liver
microscopy
drugs
compartments

Spatial Temporal Analysis of Fieldwise Flow in Microvasculature

Clendenon, S. G., Fu, X., Von Hoene, R. A., Clendenon, J. L., Sluka, J. P., Winfree, S., Mang, H., Martinez, M., Filson, A., Klaunig, J. E., Glazier, J. A. & Dunn, K. W., Nov 18 2019, In : Journal of visualized experiments : JoVE. 153

Research output: Contribution to journalArticle

Spatio-Temporal Analysis
Capillary flow
Microvessels
Flow velocity
Blood