Find Publications

2019

Acute respiratory failure and the kinetics of neutrophil recovery in pediatric hematopoietic cell transplantation: a multicenter study

Investigators of the Pediatric Acute Lung Injury and Sepsis Network, Jan 1 2019, (Accepted/In press) In : Bone Marrow Transplantation.

Research output: Contribution to journalArticle

Cell Transplantation
Artificial Respiration
Respiratory Insufficiency
Multicenter Studies
Neutrophils

Acute Sport Concussion Assessment Optimization: A Prospective Assessment from the CARE Consortium

Care Consortium Investigators, Dec 1 2019, In : Sports Medicine. 49, 12, p. 1977-1987 11 p.

Research output: Contribution to journalArticle

Sports
Wounds and Injuries
Athletes
Symptom Assessment
Regression Analysis

A Cyclin A—Myb-MuvB—Aurora B network regulates the choice between mitotic cycles and polyploid endoreplication cycles

Rotelli, M. D., Policastro, R. A., Bolling, A. M., Killion, A. W., Weinberg, A. J., Dixon, M. J., Zentner, G. E., Walczak, C., Lilly, M. A. & Calvi, B. R., Jul 1 2019, In : PLoS Genetics. 15, 7, e1008253.

Research output: Contribution to journalArticle

Open Access
Endoreduplication
Cyclins
Polyploidy
cyclins
polyploidy

Adapting Cognitive Task Analysis to Investigate Clinical Decision Making and Medication Safety Incidents

Russ, A. L., Militello, L. G., Glassman, P. A., Arthur, K. J., Zillich, A. J. & Weiner, M., Sep 1 2019, In : Journal of Patient Safety. 15, 3, p. 191-197 7 p.

Research output: Contribution to journalArticle

Delivery of Health Care
Safety
Electronic Health Records
Interviews
Patient Safety

Adapting to cell stress from inside and out

Staschke, K. A. & Wek, R., Jul 1 2019, In : Nature Cell Biology. 21, 7, p. 799-800 2 p.

Research output: Contribution to journalComment/debate

Neoplasms
Therapeutics
6 Citations (Scopus)

Adaptive NK cells in people exposed to Plasmodium falciparum correlate with protection from malaria

Hart, G. T., Tran, T., Theorell, J., Schlums, H., Arora, G., Rajagopalan, S., Sangala, A. D. J., Welsh, K. J., Traore, B., Pierce, S. K., Crompton, P. D., Bryceson, Y. T. & Long, E. O., Jun 3 2019, In : The Journal of experimental medicine. 216, 6, p. 1280-1290 11 p.

Research output: Contribution to journalArticle

Open Access
Plasmodium falciparum
Natural Killer Cells
Malaria
Antibodies
Mali
2 Citations (Scopus)
Rete Testis
Mesothelioma
Adenocarcinoma
Neoplasm Metastasis
Epithelium

Adenovirus infection and outbreaks: What you need to know

Dela Cruz, C. S., Pasnick, S., Gross, J. E., Keller, J., Graham Carlos, W., Cao, B., Jamil, S. & Sockrider, M., Apr 1 2019, In : American Journal of Respiratory and Critical Care Medicine. 199, 7, p. P13-P14

Research output: Contribution to journalComment/debate

Open Access
Adenoviridae Infections
Disease Outbreaks
1 Citation (Scopus)

Adherence to clinical guidelines is associated with reduced inpatient mortality among children with severe anemia in Ugandan hospitals

Opoka, R. O., Ssemata, A. S., Oyang, W., Nambuya, H., John, C., Karamagi, C. & Tumwine, J. K., Jan 1 2019, In : PLoS One. 14, 1, e0210982.

Research output: Contribution to journalArticle

Child Mortality
anemia
Anemia
Inpatients
Guidelines

Adherence with bladder irrigation following augmentation

Peycelon, M., Szymanski, K. M., Francesca Monn, M., Salama, A. K., Risk, H., Cain, M. P. & Misseri, R., Jan 1 2019, (Accepted/In press) In : Journal of Pediatric Urology.

Research output: Contribution to journalArticle

Urinary Bladder
Intermittent Urethral Catheterization
Spinal Dysraphism
Caregivers
Urinary Bladder Calculi
Open Access
Amyotrophic Lateral Sclerosis
Conditioned Culture Medium
Stem Cells
1 Citation (Scopus)

Adiposity, Insulin Resistance, and Bone Mass in Children and Adolescents

Kindler, J. M., Lobene, A. J., Vogel, K. A., Martin, B. R., McCabe, L. D., Peacock, M., Warden, S. J., McCabe, G. P. & Weaver, C. M., Mar 1 2019, In : The Journal of clinical endocrinology and metabolism. 104, 3, p. 892-899 8 p.

Research output: Contribution to journalArticle

Adiposity
Insulin Resistance
Bone
Insulin
Bone and Bones

A dirty multi-task learning method for multi-modal brain imaging genetics

for the Alzheimer’s Disease Neuroimaging Initiative, Jan 1 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 447-455 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11767 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Multi-task Learning
Brain
Imaging
Imaging techniques
Modality

A distinct transcriptional profile in response to endothelial monocyte activating polypeptide II is partially mediated by JAK-STAT3 in murine macrophages

Lee, D. D., Hochstetler, A., Murphy, C., Lowe, C. W. & Schwarz, M. A., Jan 1 2019, In : American Journal of Physiology - Cell Physiology. 317, 3, p. C449-C456

Research output: Contribution to journalArticle

Janus Kinases
STAT3 Transcription Factor
Macrophages
Janus Kinase 1
Thioglycolates
19 Citations (Scopus)

Adjuvant chemotherapy plus radiation for locally advanced endometrial cancer

Matei, D., Filiaci, V., Randall, M. E., Mutch, D., Steinhoff, M. M., DiSilvestro, P. A., Moxley, K. M., Kim, Y. M., Powell, M. A., O’Malley, D. M., Spirtos, N. M., Small, W., Tewari, K. S., Richards, W. E., Nakayama, J., Matulonis, U. A., Huang, H. Q. & Miller, D. S., Jun 13 2019, In : New England Journal of Medicine. 380, 24, p. 2317-2326 10 p.

Research output: Contribution to journalArticle

Adjuvant Chemotherapy
Endometrial Neoplasms
Radiation
Drug Therapy
Confidence Intervals

Admission plasma uromodulin and the risk of acute kidney injury in hospitalized patients with cirrhosis: a pilot study

Patidar, K. R., Garimella, P. S., Macedo, E., Slaven, J. E., Ghabril, M. S., Weber, R. E., Anderson, M., Orman, E. S., Nephew, L. D., Desai, A. P., Chalasani, N. P. & El-Achkar, T. M., Oct 1 2019, In : American journal of physiology. Gastrointestinal and liver physiology. 317, 4, p. G447-G452

Research output: Contribution to journalArticle

Uromodulin
Acute Kidney Injury
Fibrosis
Creatinine
Urine

Adolescent Contraception in the Emergency Department: Abnormal Uterine Bleeding and Beyond

Edwards, A. J. & Williams, R., Mar 1 2019, In : Clinical Pediatric Emergency Medicine. 20, 1, p. 54-62 9 p.

Research output: Contribution to journalArticle

Uterine Hemorrhage
Contraception
Hospital Emergency Service
Contraceptive Agents
Menstruation
1 Citation (Scopus)
Ventral Tegmental Area
Cholinergic Agents
Rats
Ethanol
Genes

Adrenocorticotropic Hormone in the Treatment of Focal Segmental Glomerulosclerosis Following Kidney Transplantation

Grafals, M. & Sharfuddin, A., Jul 1 2019, In : Transplantation proceedings. 51, 6, p. 1831-1837 7 p.

Research output: Contribution to journalArticle

Open Access
Focal Segmental Glomerulosclerosis
Kidney Transplantation
Adrenocorticotropic Hormone
Gels
Transplants

Advance Care Planning in A Preoperative Clinic: A Retrospective Chart Review

Sinha, S., Gruber, R. N., Cottingham, A. H., Nation, B., Lane, K. A., Bo, N. & Torke, A., Jan 1 2019, (Accepted/In press) In : Journal of General Internal Medicine.

Research output: Contribution to journalArticle

Advance Care Planning

Advanced imaging techniques for chronic pancreatitis

Parakh, A. & Tirkes, T., Jan 1 2019, (Accepted/In press) In : Abdominal Radiology.

Research output: Contribution to journalReview article

Chronic Pancreatitis
Tomography
Organ Size
Acinar Cells
Pancreatic Ducts
3 Citations (Scopus)

Advanced Therapy in Traumatic Brain Injury Inpatient Rehabilitation: Effects on Outcomes During the First Year After Discharge

Timpson, M., Hade, E. M., Beaulieu, C., Horn, S. D., Hammond, F., Peng, J., Montgomery, E., Giuffrida, C., Gilchrist, K., Lash, A., Dijkers, M., Corrigan, J. D. & Bogner, J., Jan 1 2019, In : Archives of Physical Medicine and Rehabilitation.

Research output: Contribution to journalArticle

Inpatients
Rehabilitation
Propensity Score
Evidence-Based Practice
Therapeutics
Open Access
Hypogonadism
Testicular Neoplasms
Multicenter Studies
Drug Therapy
Survivors
Chronic Renal Insufficiency
Safety
Rural Hospitals
Confusion
Kidney Pelvis
5 Citations (Scopus)
Testicular Neoplasms
Robotics
Lymph Node Excision
Recurrence
Testicular Diseases

Advice Regarding Alcohol Use by Individuals With Nonalcoholic Fatty Liver Disease: Primum non nocere

Dunn, W. & Chalasani, N., Jan 1 2019, In : Hepatology. 69, 1, p. 9-11 3 p.

Research output: Contribution to journalEditorial

Alcohols
Non-alcoholic Fatty Liver Disease

Aetiology and prevalence of mixed-infections and mono-infections in non-gonococcal urethritis in men: A case-control study

Jordan, S. J., Toh, E., Williams, J. A., Fortenberry, L., Lapradd, M. L., Katz, B. P., Batteiger, B. E., Nelson, D. E. & Batteiger, T. A., Jan 1 2019, (Accepted/In press) In : Sexually transmitted infections.

Research output: Contribution to journalArticle

Urethritis
Coinfection
Ureaplasma urealyticum
Case-Control Studies
Infection

A fast iterative algorithm for high-dimensional differential network

Tang, Z., Yu, Z. & Wang, C., Jan 1 2019, (Accepted/In press) In : Computational Statistics.

Research output: Contribution to journalArticle

High-dimensional Data
Iterative Algorithm
Fast Algorithm
High-dimensional
Sample Covariance Matrix

A feasibility study of telemedicine for paediatric sickle cell patients living in a rural medically underserved area

Jacob, S. A., Carroll, A. E. & Bennett, W. E., Jan 1 2019, (Accepted/In press) In : Journal of Telemedicine and Telecare.

Research output: Contribution to journalArticle

Open Access
Medically Underserved Area
Telemedicine
Feasibility Studies
Sickle Cell Anemia
Pediatrics

A First-Person Mentee Second-Person Mentor AR Interface for Surgical Telementoring

Lin, C., Andersen, D., Popescu, V., Rojas-Munoz, E., Cabrera, M. E., Mullis, B., Zarzaur, B., Anderson, K., Marley, S. & Wachs, J., Apr 25 2019, Adjunct Proceedings - 2018 IEEE International Symposium on Mixed and Augmented Reality, ISMAR-Adjunct 2018. Institute of Electrical and Electronics Engineers Inc., p. 3-8 6 p. 8699305. (Adjunct Proceedings - 2018 IEEE International Symposium on Mixed and Augmented Reality, ISMAR-Adjunct 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Augmented reality
Display devices
Depth perception
Surgery
Cameras
15 Citations (Scopus)

AGA Clinical Practice Update on Functional Gastrointestinal Symptoms in Patients With Inflammatory Bowel Disease: Expert Review

Colombel, J. F., Shin, A. & Gibson, P. R., Feb 1 2019, In : Clinical Gastroenterology and Hepatology. 17, 3, p. 380-390.e1

Research output: Contribution to journalReview article

Inflammatory Bowel Diseases
Practice Guidelines
Leukocyte L1 Antigen Complex
Constipation
Complementary Therapies

Age- and sex-dependent role of osteocytic pannexin1 on bone and muscle mass and strength

Aguilar-Perez, A., Pacheco-Costa, R., Atkinson, E. G., Deosthale, P., Davis, H. M., Essex, A. L., Dilley, J. E., Gomez, L., Rupert, J. E., Zimmers, T. A., Thompson, R. J., Allen, M. R. & Plotkin, L. I., Dec 1 2019, In : Scientific reports. 9, 1, 13903.

Research output: Contribution to journalArticle

Open Access
Muscle Strength
Bone and Bones
Muscles
Connexins
Intercellular Junctions
3 Citations (Scopus)

Age-of-diagnosis dependent ileal immune intensification and reduced alpha-defensin in older versus younger pediatric Crohn Disease patients despite already established dysbiosis

Haberman, Y., Schirmer, M., Dexheimer, P. J., Karns, R., Braun, T., Kim, M. O., Walters, T. D., Baldassano, R. N., Noe, J. D., Rosh, J., Markowitz, J., Crandall, W. V., Mack, D. R., Griffiths, A. M., Heyman, M. B., Baker, S. S., Kellermayer, R., Moulton, D., Patel, A. S., Gulati, A. S. & 18 others, Steiner, S., LeLeiko, N., Otley, A., Oliva-Hemker, M., Ziring, D., Kirschner, B. S., Keljo, D. J., Guthery, S. L., Cohen, S. A., Snapper, S., Evans, J., Dubinsky, M., Aronow, B., Hyams, J. S., Kugathasan, S., Huttenhower, C., Xavier, R. J. & Denson, L. A., Mar 1 2019, In : Mucosal Immunology. 12, 2, p. 491-502 12 p.

Research output: Contribution to journalArticle

alpha-Defensins
Dysbiosis
Defensins
Paneth Cells
Peyer's Patches

Ages at menarche and menopause, and mortality among postmenopausal women

Zhang, X., Liu, L., Song, F., Song, Y. & Dai, H., Dec 2019, In : Maturitas. 130, p. 50-56 7 p.

Research output: Contribution to journalArticle

Menarche
Menopause
Mortality
Sensitivity analysis
Hazards
Endoleak
Equipment and Supplies
Aneurysm
Rupture
Incidence

Agile Implementation

Solid, C., Nazir, A. & Boustani, M., Jul 1 2019, In : Journal of the American Medical Directors Association. 20, 7, p. 795-797 3 p.

Research output: Contribution to journalEditorial

Aging negatively impacts the ability of megakaryocytes to stimulate osteoblast proliferation and bone mass

Maupin, K. A., Himes, E. R., Plett, A. P., Chua, H. L., Singh, P., Ghosh, J., Mohamad, S. F., Abeysekera, I., Fisher, A., Sampson, C., Hong, J. M., Childress, P., Alvarez, M., Srour, E. F., Bruzzaniti, A., Pelus, L., Orschell, C. M. & Kacena, M. A., Oct 1 2019, In : Bone. 127, p. 452-459 8 p.

Research output: Contribution to journalArticle

Megakaryocytes
Osteoblasts
Bone and Bones
Coculture Techniques
Transplantation

A high throughput substrate binding assay reveals hexachlorophene as an inhibitor of the ER-resident HSP70 chaperone GRP78

Ambrose, A. J., Zerio, C. J., Sivinski, J., Schmidlin, C. J., Shi, T., Ross, A. B., Widrick, K. J., Johnson, S. M., Zhang, D. D. & Chapman, E., Jul 15 2019, In : Bioorganic and Medicinal Chemistry Letters. 29, 14, p. 1689-1693 5 p.

Research output: Contribution to journalArticle

Hexachlorophene
HSP70 Heat-Shock Proteins
Assays
Throughput
Substrates

A laboratory medicine best practices systematic review and meta-analysis of nucleic acid amplification tests (NAATs) and algorithms including NAATs for the diagnosis of clostridioides (Clostridium) difficile in adults

Kraft, C. S., Parrott, J. S., Cornish, N. E., Rubinstein, M. L., Weissfeld, A. S., McNult, P., Nachamkin, I., Humphries, R. M., Kirn, T. J., Bard, J. D., Lutgring, J. D., Gullett, J. C., Bittencourt, C. E., Benson, S., Bobenchik, A. M., Sautter, R. L., Baselski, V., Atlas, M. C., Marlowe, E. M., Miller, N. S. & 4 others, Fischer, M., Richter, S. S., Gilligan, P. & Snyder, J. W., Jul 2019, In : Clinical Microbiology Reviews. 32, 3, e00032-18.

Research output: Contribution to journalArticle

Open Access
Nucleic Acid Amplification Techniques
Clostridium difficile
Glutamate Dehydrogenase
Practice Guidelines
Meta-Analysis
2 Citations (Scopus)

A laser-guided spinal cord displacement injury in adult mice

Wu, X., Qu, W., Bakare, A. A., Zhang, Y. P., Fry, C. M. E., Shields, L. B. E., Shields, C. B. & Xu, X-M., Feb 1 2019, In : Journal of Neurotrauma. 36, 3, p. 460-468 9 p.

Research output: Contribution to journalArticle

Spinal Cord Injuries
Lasers
Wounds and Injuries
Walking
Spinal Cord

Alcohol Abstinence Does Not Fully Reverse Abnormalities of Mucosal-Associated Invariant T Cells in the Blood of Patients With Alcoholic Hepatitis

Li, W., Lin, E. L., Liangpunsakul, S., Lan, J., Chalasani, S., Rane, S., Puri, P., Kamath, P. S., Sanyal, A. J., Shah, V. H., Radaeva, S., Crabb, D., Chalasani, N. & Yu, A., Jun 1 2019, In : Clinical and translational gastroenterology. 10, 6, p. e00052

Research output: Contribution to journalArticle

Open Access
Alcohol Abstinence
Alcoholic Hepatitis
HLA Antigens
Blood Cells
Mucosal-Associated Invariant T Cells
2 Citations (Scopus)

ALDH2 deficiency promotes alcohol-associated liver cancer by activating oncogenic pathways via oxidized DNA-enriched extracellular vesicles

Seo, W., Gao, Y., He, Y., Sun, J., Xu, H., Feng, D., Park, S. H., Cho, Y. E., Guillot, A., Ren, T., Wu, R., Wang, J., Kim, S. J., Hwang, S., Liangpunsakul, S., Yang, Y., Niu, J. & Gao, B., Jan 1 2019, (Accepted/In press) In : Journal of Hepatology.

Research output: Contribution to journalArticle

Aldehyde Dehydrogenase
Liver Neoplasms
Hepatocellular Carcinoma
Alcohols
DNA

ALECT2 and NASH

Cummings, O., Dasgupta, N. & Benson, M., Mar 29 2019, In : Amyloid. 26, sup1, p. 158-159 2 p.

Research output: Contribution to journalLetter

3 Citations (Scopus)

Aligning use of intensive care with patient values in the USA: past, present, and future

Turnbull, A. E., Bosslet, G. & Kross, E. K., Jul 1 2019, In : The Lancet Respiratory Medicine. 7, 7, p. 626-638 13 p.

Research output: Contribution to journalReview article

Critical Care
Intensive Care Units
Health
Research

All electrophysiologists have ADD: Is a cure in sight?

Miller, J. & Shirazi, J. T., Feb 1 2019, In : Heart Rhythm. 16, 2, p. 170-171 2 p.

Research output: Contribution to journalEditorial

1 Citation (Scopus)

Allele-specific expression and high-throughput reporter assay reveal functional genetic variants associated with alcohol use disorders

Rao, X., Thapa, K. S., Chen, A. B., Lin, H., Gao, H., Reiter, J. L., Hargreaves, K. A., Ipe, J., Lai, D., Xuei, X., Wang, Y., Gu, H., Kapoor, M., Farris, S. P., Tischfield, J., Foroud, T., Goate, A. M., Skaar, T. C., Mayfield, R. D., Edenberg, H. J. & 1 others, Liu, Y., Jan 1 2019, (Accepted/In press) In : Molecular Psychiatry.

Research output: Contribution to journalArticle

Alleles
Single Nucleotide Polymorphism
Alcohols
Genome-Wide Association Study
3' Untranslated Regions
2 Citations (Scopus)

Allogeneic hematopoietic cell transplantation compared to chemotherapy consolidation in older acute myeloid leukemia (AML) patients 60–75 years in first complete remission (CR1): an alliance (A151509), SWOG, ECOG-ACRIN, and CIBMTR study

Ustun, C., Le-Rademacher, J., Wang, H. L., Othus, M., Sun, Z., Major, B., Zhang, M. J., Storrick, E., Lafky, J. M., Chow, S., Mrózek, K., Attar, E. C., Nand, S., Bloomfield, C. D., Cripe, L., Tallman, M. S., Appelbaum, F., Larson, R. A., Marcucci, G., Roboz, G. J. & 12 others, Uy, G. L., Stone, R. M., Jatoi, A., Shea, T. C., de Lima, M., Foran, J. M., Sandmaier, B. M., Litzow, M. R., Erba, H. P., Hurria, A., Weisdorf, D. J. & Artz, A. S., Jan 1 2019, In : Leukemia.

Research output: Contribution to journalArticle

Consolidation Chemotherapy
Cell Transplantation
Acute Myeloid Leukemia
Drug Therapy
Survival
1 Citation (Scopus)

Alterations in White Matter Microstructure and Connectivity in Young Adults with Alcohol Use Disorder

Chumin, E. J., Grecco, G. G., Dzemidzic, M., Cheng, H., Finn, P., Sporns, O., Newman, S. D. & Yoder, K., Jan 1 2019, In : Alcoholism: Clinical and Experimental Research.

Research output: Contribution to journalArticle

Young Adult
Alcohols
Microstructure
Connectome
Anisotropy
22 Citations (Scopus)

Altered bile acid profile associates with cognitive impairment in Alzheimer's disease—An emerging role for gut microbiome

Alzheimer's Disease Neuroimaging Initiative and the Alzheimer Disease Metabolomics Consortium, Jan 1 2019, In : Alzheimer's and Dementia. 15, 1, p. 76-92 17 p.

Research output: Contribution to journalArticle

Open Access
Bile Acids and Salts
Alzheimer Disease
Cholic Acid
Deoxycholic Acid
Brain
10 Citations (Scopus)

Altered bile acid profile in mild cognitive impairment and Alzheimer's disease: Relationship to neuroimaging and CSF biomarkers

Alzheimer's Disease Neuroimaging Initiative and the Alzheimer Disease Metabolomics Consortium, Feb 1 2019, In : Alzheimer's and Dementia. 15, 2, p. 232-244 13 p.

Research output: Contribution to journalArticle

Bile Acids and Salts
Neuroimaging
Cerebrospinal Fluid
Alzheimer Disease
Biomarkers