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Toxicity of Radiosurgery for Brainstem Metastases

Patel, A., Dong, T., Ansari, S., Cohen-Gadol, A., Watson, G. A., Moraes, F. Y. D., Nakamura, M., Murovic, J., Chang, S. D., Hatiboglu, M. A., Chung, C., Miller, J. & Lautenschlaeger, T., Jan 1 2018, (Accepted/In press) In : World Neurosurgery.

Research output: Contribution to journalArticle

3 Scopus citations

Toxoplasma gondii AP2IX-4 regulates gene expression during bradyzoite development

Huang, S., Holmes, M. J., Radke, J. B., Hong, D. P., Liu, T. K., White, M. W. & Sullivan, W. J., Mar 1 2017, In : mSphere. 2, 2, e00054-17.

Research output: Contribution to journalArticle

17 Scopus citations

Toxoplasma gondii AP2XII-2 Contributes to Proper Progression through S-Phase of the Cell Cycle

Srivastava, S., White, M. W. & Sullivan, W. J., Sep 16 2020, In : mSphere. 5, 5

Research output: Contribution to journalArticle

Open Access

Toxoplasma gondii co-opts the unfolded protein response to enhance migration and dissemination of infected host cells

Augusto, L., Martynowicz, J., Amin, P. H., Alakhras, N. S., Kaplan, M. H., Wek, R. C. & Sullivan, W. J., Aug 2020, In : mBio. 11, 4, p. 1-13 13 p., e00915-20.

Research output: Contribution to journalArticle

Open Access

Toxoplasma gondii-positive human sera recognise intracellular tachyzoites and bradyzoites with diverse patterns of immunoreactivity

Roiko, M. S., LaFavers, K., Leland, D. & Arrizabalaga, G., Mar 2018, In : International Journal for Parasitology. 48, 3-4, p. 225-232 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

Toxoplasmosis in non-cardiac solid organ transplant recipients: A case series and review of literature

Ramanan, P., Scherger, S., Benamu, E., Bajrovic, V., Jackson, W., Hage, C. A., Hakki, M., Baddley, J. W. & Abidi, M. Z., Feb 1 2020, In : Transplant Infectious Disease. 22, 1, e13218.

Research output: Contribution to journalArticle

1 Scopus citations

Tp53 and its potential therapeutic role as a target in bladder cancer

Ciccarese, C., Massari, F., Blanca, A., Tortora, G., Montironi, R., Cheng, L., Scarpelli, M., Raspollini, M. R., Vau, N., Fonseca, J. & Lopez-Beltran, A., Apr 3 2017, In : Expert Opinion on Therapeutic Targets. 21, 4, p. 401-414 14 p.

Research output: Contribution to journalReview article

11 Scopus citations
Open Access
2 Scopus citations

Tracheostomy After Operations for Congenital Heart Disease: An Analysis of the Society of Thoracic Surgeons Congenital Heart Surgery Database

Mastropietro, C. W., Benneyworth, B. D., Turrentine, M., Wallace, A. S., Hornik, C. P., Jacobs, J. P. & Jacobs, M. L., 2016, (Accepted/In press) In : Annals of Thoracic Surgery.

Research output: Contribution to journalArticle

12 Scopus citations

Tracheostomy Following Surgery for Congenital Heart Disease: A 14-year Institutional Experience

Benneyworth, B. D., Shao, J. M., Cristea, A. I., Ackerman, V., Rodefeld, M., Turrentine, M. & Brown, J., May 1 2016, In : World journal for pediatric & congenital heart surgery. 7, 3, p. 360-366 7 p.

Research output: Contribution to journalArticle

2 Scopus citations

Tracheostomy post liver transplant: Predictors, complications, and outcomes

Graham, R. C., Bush, W. J., Mella, J. S., Fridell, J. A., Ekser, B., Mihaylov, P., Kubal, C. A. & Mangus, R. S., 2020, In : Annals of transplantation. 25, p. e920630-1 e920630.

Research output: Contribution to journalArticle

Tracking patterns of needs during a telephone follow-up programme for family caregivers of persons with stroke

Bakas, T., Jessup, N. M., McLennon, S. M., Habermann, B., Weaver, M. T. & Morrison, G., Aug 27 2016, In : Disability and Rehabilitation. 38, 18, p. 1780-1790 11 p.

Research output: Contribution to journalArticle

6 Scopus citations

Tracking the transition of adolescents into adult HIV care: A global assessment

Sohn, A. H., Vreeman, R. C. & Judd, A., May 16 2017, In : Journal of the International AIDS Society. 20, 21878.

Research output: Contribution to journalEditorial

9 Scopus citations

Tracking white matter degeneration in asymptomatic and symptomatic MAPT mutation carriers

LEFFTDS Consortium, Nov 2019, In : Neurobiology of Aging. 83, p. 54-62 9 p.

Research output: Contribution to journalArticle

3 Scopus citations

Traditional and systems biology based drug discovery for the rare tumor syndrome neurofibromatosis type 2

Allaway, R., Angus, S. P., Beauchamp, R. L., Blakeley, J. O., Bott, M., Burns, S. S., Carlstedt, A., Chang, L. S., Chen, X., Clapp, D. W., DeSouza, P. A., Erdin, S., Fernandez-Valle, C., Guinney, J., Gusella, J. F., Haggarty, S. J., Johnson, G. L., La Rosa, S., Morrison, H., Petrilli, A. M. & 11 others, Plotkin, S. R., Pratap, A., Ramesh, V., Sciaky, N., Stemmer-Rachamimov, A., Stuhlmiller, T. J., Talkowski, M. E., Welling, D. B., Yates, C. W., Zawistowski, J. S. & Zhao, W. N., Jun 2018, In : PloS one. 13, 6, e0197350.

Research output: Contribution to journalArticle

5 Scopus citations

Traditional birth attendants and birth outcomes in low-middle income countries: A review

Garces, A., McClure, E. M., Espinoza, L., Saleem, S., Figueroa, L., Bucher, S. & Goldenberg, R. L., Aug 2019, In : Seminars in Perinatology. 43, 5, p. 247-251 5 p.

Research output: Contribution to journalReview article

Traditional immune-modulating drugs

Wolverton, S. & Aouthmany, M., Apr 24 2017, Clinical and Basic Immunodermatology: Second Edition. Springer International Publishing, p. 803-814 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Trails of discovery: Unbreak my heart: A short history of the defibrillator and CPR

Sullivan, W., 2016, In : Dialogues in Cardiovascular Medicine. 21, 3, p. 217-221 5 p.

Research output: Contribution to journalArticle

Trainee Autonomy and Patient Safety

George, B. C., Dunnington, G. L. & Darosa, D. A., May 1 2018, In : Annals of surgery. 267, 5, p. 820-822 3 p.

Research output: Contribution to journalReview article

7 Scopus citations

Training cardiac surgeons: the Indiana University experience

Brown, J., Dec 1 2016, In : Cardiology in the Young. 26, 8, p. 1484-1490 7 p.

Research output: Contribution to journalComment/debate

1 Scopus citations

Training in robotic urologic surgery

Weintraub, M. D., Kheyfets, S. V. & Sundaram, C. P., Jan 1 2018, Robotics in Genitourinary Surgery, Second Edition. Springer International Publishing, p. 163-173 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Training mouse pathologists: 15 years of workshops on the pathology of mouse models of human disease

Sundberg, J. P., Boyd, K., HogenEsch, H., Nikitin, A. Y., Treuting, P. M. & Ward, J. M., Apr 19 2017, In : Lab Animal. 46, 5, p. 204-206 3 p.

Research output: Contribution to journalLetter

Training mouse pathologists: 16th annual workshop on the pathology of mouse models of human disease

Sundberg, J. P., Boyd, K., HogenEsch, H., Nikitin, A. Y., Treuting, P. M. & Ward, J. M., Jan 31 2018, In : Lab Animal. 47, 2, p. 38-40 3 p.

Research output: Contribution to journalLetter

2 Scopus citations

Training Patterns and Lifetime Career Achievements of US Academic Cardiothoracic Surgeons

Rosati, C. M., Valsangkar, N. P., Gaudino, M., Blitzer, D., Vardas, P. N., Girardi, L. N., Turrentine, M., Brown, J. & Koniaris, L., Oct 12 2016, (Accepted/In press) In : World Journal of Surgery. p. 1-10 10 p.

Research output: Contribution to journalArticle

1 Scopus citations

Training the Workforce to Conduct Embedded Pragmatic Clinical Trials to Improve Care for People Living with Dementia and Their Caregivers

Callahan, C. M., Torke, A. M., Alder, C. A., Broughton, J. A. & Mitchell, S. L., Jul 1 2020, In : Journal of the American Geriatrics Society. 68, S2, p. S21-S27

Research output: Contribution to journalArticle

Open Access

Tranexamic Acid and Computer-Assisted Surgery in Cemented and Cementless Total Knee Arthroplasty: Are the Effects Additive for Blood Conservation?

Fleischman, M., Hood, M., Ziemba-Davis, M. & Meneghini, R. M., Jul 25 2017, In : Surgical technology international. 30, p. 268-273 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

Trans,trans-farnesol, an antimicrobial natural compound, improves glass ionomer cement properties

De Castilho, A. R. F., Rosalen, P. L., De Souza Araújo, I. J., Kitagawa, I. L., De Araújo Costa, C. A. G., Janal, M. N., Alves, M. C., Duarte, S., Filho, P. N. L., Stipp, R. N. & Puppin-Rontani, R. M., Aug 1 2019, In : PloS one. 14, 8, e0220718.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Transancestral GWAS of alcohol dependence reveals common genetic underpinnings with psychiatric disorders

23andMe Research Team, Dec 1 2018, In : Nature Neuroscience. 21, 12, p. 1656-1669 14 p.

Research output: Contribution to journalArticle

Open Access
92 Scopus citations

Trans and cis factors affecting A-to-I RNA editing efficiency of a noncoding editing target in C. elegans

Washburn, M. C. & Hundley, H. A., May 2016, In : RNA. 22, 5, p. 722-728 7 p.

Research output: Contribution to journalArticle

5 Scopus citations

Transatlantic editorial: Institutional investigations of ethically flawed reports in cardiothoracic surgery journals

Cardiothoracic Ethics Forum, May 2020, In : Journal of Thoracic and Cardiovascular Surgery. 159, 5, p. 1903-1905 3 p.

Research output: Contribution to journalEditorial

Open Access

Transatlantic editorial: Institutional investigations of ethically flawed reports in cardiothoracic surgery journals

Sade, R. M., Rylski, B., Swain, J. A., Entwistle, J. W. C., Ceppa, D. K. P., Blitzer, D., Carpenter, A. J., Chen, E. P., Cohen, R. G., D'amico, T. A., Drake, D. H., Fedak, P. W. M., Fenton, K. N., Loebe, M., Mayer, J. E., Mckneally, M. F., Merrill, W. H., Millikan, S. J., Moffatt-Bruce, S. D., Murthy, S. C. & 9 others, Naunheim, K. S., Orringer, M. B., Ray, S., Romano, J. C., Sade, R. M., Starnes, S. L., Tweddell, J. S., Whyte, R. I. & Zwischenberger, J. B., Apr 1 2020, In : European Journal of Cardio-thoracic Surgery. 57, 4, p. 617-619 3 p.

Research output: Contribution to journalEditorial

Open Access
1 Scopus citations

Transatlantic Editorial: Institutional Investigations of Ethically Flawed Reports in Cardiothoracic Surgery Journals

Sade, R. M., Rylski, B., Swain, J. A., Entwistle, J. W. C., Ceppa, D. K. P., Blitzer, D., Carpenter, A. J., Chen, E. P., Cohen, R. G., D'Amico, T. A., Drake, D. H., Fedak, P. W. M., Fenton, K. N., Loebe, M., Mayer, J. E., McKneally, M. F., Merrill, W. H., Millikan, S. J., Moffatt-Bruce, S. D., Murthy, S. C. & 8 others, Naunheim, K. S., Orringer, M. B., Ray, S., Romano, J. C., Starnes, S. L., Tweddell, J. S., Whyte, R. I. & Zwischenberger, J. B., Apr 2020, In : Annals of Thoracic Surgery. 109, 4, p. 993-995 3 p.

Research output: Contribution to journalEditorial

Transatlantic engagement: a novel dental educational exchange

Waterhouse, P. J., Kowolik, J. E., Schrader, S. M., Howe, D. & Holmes, R. D., Apr 1 2020, In : British Dental Journal. 228, 8, p. 637-642 6 p.

Research output: Contribution to journalArticle

Transcarotid artery revascularization versus transfemoral carotid artery stenting in the Society for Vascular Surgery Vascular Quality Initiative

Malas, M. B., Dakour-Aridi, H., Wang, G. J., Kashyap, V. S., Motaganahalli, R. L., Eldrup-Jorgensen, J., Cronenwett, J. L. & Schermerhorn, M. L., Jan 2019, In : Journal of vascular surgery. 69, 1, p. 92-103.e2

Research output: Contribution to journalArticle

49 Scopus citations

Transcatheter aortic valve replacement versus aortic valve bypass a comparison of outcomes and economics presented at the sixty-first annual meeting of the southern thoracic surgical association, Tucson, AZ, Nov 5-8, 2014.

Brown, J., Boyd, J. H., Patel, P. M., Baker, M. L., Syed, A., Ladowski, J. & Corvera, J., Jan 1 2016, In : Annals of Thoracic Surgery. 101, 1, p. 49-54 6 p.

Research output: Contribution to journalArticle

4 Scopus citations

Transcranial approaches to the sellar and parasellar areas

Bohnstedt, B. N., Eads, T., Weyhenmeyer, J. & Cohen-Gadol, A. A., Sep 15 2017, Transsphenoidal Surgery: Complication Avoidance and Management Techniques. Springer International Publishing, p. 191-211 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Transcriptional fidelities of human mitochondrial POLRMT, yeast mitochondrial Rpo41, and phage T7 single-subunit RNA polymerases

Sultana, S., Solotchi, M., Ramachandran, A., Patel, S. S. & Wek, R. C., Nov 3 2017, In : Journal of Biological Chemistry. 292, 44, p. 18145-18160 16 p.

Research output: Contribution to journalArticle

11 Scopus citations

Transcriptional Networks in Single Perivascular Cells Sorted from Human Adipose Tissue Reveal a Hierarchy of Mesenchymal Stem Cells

Hardy, W. R., Moldovan, N. I., Moldovan, L., Livak, K. J., Datta, K., Goswami, C., Corselli, M., Traktuev, D. O., Murray, I. R., Péault, B. & March, K., May 2017, In : STEM CELLS. 35, 5, p. 1273-1289 17 p.

Research output: Contribution to journalArticle

34 Scopus citations

Transcriptional regulation of PNPLA3 and its impact on susceptibility to nonalcoholic fatty liver Disease (NAFLD) in humans

FLIP Investigators & FLPGP Investigators, 2017, In : Aging. 9, 1, p. 26-40 15 p.

Research output: Contribution to journalArticle

1 Scopus citations

Transcriptional repression by ApiAP2 factors is central to chronic toxoplasmosis

Radke, J. B., Worth, D., Hong, D., Huang, S., Sullivan, W. J., Wilson, E. H. & White, M. W., May 2018, In : PLoS pathogens. 14, 5, e1007035.

Research output: Contribution to journalArticle

20 Scopus citations

Transcription factor ATF4 directs basal and stress-induced gene expression in the unfolded protein response and cholesterol metabolism in the liver

Fusakio, M. E., Willy, J. A., Wang, Y., Mirek, E. T., Baghdadi, R. J. T. A., Adams, C. M., Anthony, T. G. & Wek, R. C., May 1 2016, In : Molecular Biology of the Cell. 27, 9, p. 1536-1551 16 p.

Research output: Contribution to journalArticle

62 Scopus citations

Transcription factor expression as a predictor of colon cancer prognosis: A machine learning practice

Liu, J., Dong, C., Jiang, G., Lu, X., Liu, Y. & Wu, H., Sep 21 2020, In : BMC Medical Genomics. 13, 135.

Research output: Contribution to journalArticle

Open Access

Transcription regulation by DNA methylation under stressful conditions in human cancer

Cao, S., Zhou, Y., Wu, Y., Song, T., Alsaihati, B. & Xu, Y., Dec 1 2017, In : Quantitative Biology. 5, 4, p. 328-337 10 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Transcriptome analysis of hypoxic cancer cells uncovers intron retention in EIF2B5 as a mechanism to inhibit translation

Brady, L. K., Wang, H., Radens, C. M., Bi, Y., Radovich, M., Maity, A., Ivan, C., Ivan, M., Barash, Y. & Koumenis, C., Oct 29 2017, In : PLoS Biology. 15, 10, e2002623.

Research output: Contribution to journalArticle

16 Scopus citations

Transcriptome analysis reveals manifold mechanisms of cyst development in ADPKD

De Almeida, R. M. C., Clendenon, S. G., Richards, W. G., Boedigheimer, M., Damore, M., Rossetti, S., Harris, P. C., Herbert, B. S., Xu, W. M., Wandinger-Ness, A., Ward, H. H., Glazier, J. A. & Bacallao, R. L., Nov 21 2016, In : Human genomics. 10, 1, p. 1-24 24 p.

Research output: Contribution to journalArticle

12 Scopus citations

Transcriptome-guided imaging genetic analysis via a novel sparse CCA algorithm

Alzheimer’s Disease Neuroimaging Initiative, 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics - 1st International Workshop, GRAIL 2017 6th International Workshop, MFCA 2017 and 3rd International Workshop, MICGen 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer Verlag, Vol. 10551 LNCS. p. 220-229 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10551 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcriptome profiling reveals matrisome alteration as a key feature of ovarian cancer progression

Mitra, S., Tiwari, K., Podicheti, R., Pandhiri, T., Rusch, D. B., Bonetto, A., Zhang, C. & Mitra, A. K., Oct 2019, In : Cancers. 11, 10, 1513.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Transcriptome profiling reveals significant changes in the gastric muscularis externa with obesity that partially overlap those that occur with idiopathic gastroparesis

Herring, B. P., Chen, M., Mihaylov, P., Hoggatt, A. M., Gupta, A., Nakeeb, A., Choi, J. N. & Wo, J. M., Jun 20 2019, In : BMC Medical Genomics. 12, 1, 89.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Transcriptome-wide analysis associates ID2 expression with combined pre- and post-capillary pulmonary hypertension

Arwood, M. J., Vahabi, N., Lteif, C., Sharma, R. K., Machado, R. F. & Duarte, J. D., Dec 1 2019, In : Scientific reports. 9, 1, 19572.

Research output: Contribution to journalArticle

Open Access

Transcriptomic evidence for modulation of host inflammatory responses during febrile Plasmodium falciparum malaria

Tran, T. M., Jones, M. B., Ongoiba, A., Bijker, E. M., Schats, R., Venepally, P., Skinner, J., Doumbo, S., Quinten, E., Visser, L. G., Whalen, E., Presnell, S., O'Connell, E. M., Kayentao, K., Doumbo, O. K., Chaussabel, D., Lorenzi, H., Nutman, T. B., Ottenhoff, T. H. M., Haks, M. C. & 4 others, Traore, B., Kirkness, E. F., Sauerwein, R. W. & Crompton, P. D., Oct 8 2016, In : Scientific reports. 6, 31291.

Research output: Contribution to journalArticle

29 Scopus citations