Find Publications — Indiana University School of Medicine

2019

2018 AAHKS Symposium—Outpatient Joint Replacement: Practical Guidelines for Your Program Based on Evidence, Success, and Failures, a Moderator Introduction

Meneghini, R., Jan 1 2019, (Accepted/In press) In : Journal of Arthroplasty.

Research output: Contribution to journal › Article

Replacement Arthroplasties

Outpatients

Guidelines

2D and 3D In Vitro Co-Culture for Cancer and Bone Cell Interaction Studies

Marino, S., Bishop, R. T., de Ridder, D., Delgado-Calle, J. & Reagan, M. R., Jan 1 2019, In : Methods in molecular biology (Clifton, N.J.). 1914, p. 71-98 28 p.

Research output: Contribution to journal › Article

Bone Neoplasms

Coculture Techniques

Cell Communication

Osteocytes

Osteoclasts

50 Years Ago in THE JOURNAL OF PEDIATRICS: The Role of Marihuana in Patterns of Drug Abuse by Adolescents

Ferrin, S. N. & Ott, M., Feb 1 2019, In : Journal of Pediatrics. 205, 1 p.

Research output: Contribution to journal › Article

Open Access

Cannabis

Substance-Related Disorders

A Bayesian adaptive marker-stratified design for molecularly targeted agents with customized hierarchical modeling

Zang, Y., Guo, B., Han, Y., Cao, S. & Zhang, C., Jan 1 2019, In : Statistics in Medicine.

Research output: Contribution to journal › Article

Hierarchical Modeling

Adaptive Design

Bayes Theorem

Biomarkers

Bayesian Methods

1 Citation (Scopus)

Aberrantly elevated Wnt signaling is responsible for cementum overgrowth and dental ankylosis

Wu, Y., Yuan, X., Perez, K. C., Hyman, S., Wang, L., Pellegrini, G., Salmon, B., Bellido, T. & Helms, J. A., May 1 2019, In : Bone. 122, p. 176-183 8 p.

Research output: Contribution to journal › Article

Open Access

Tooth Ankylosis

Dental Cementum

Periodontal Ligament

Tooth Movement Techniques

Tooth

Aberrations of anterior insular cortex functional connectivity in nontreatment-seeking alcoholics

Halcomb, M. E., Chumin, E. J., Goñi, J., Dzemidzic, M. & Yoder, K., Feb 28 2019, In : Psychiatry Research - Neuroimaging. 284, p. 21-28 8 p.

Research output: Contribution to journal › Article

Alcoholics

Cerebral Cortex

Alcohols

Magnetic Resonance Imaging

Parietal Lobe

A blood-based signature of cerebrospinal fluid Aβ _1–42 status

Alzheimer’s Disease Metabolomics Consortium & Alzheimer’s Disease Neuroimaging Initiative, Dec 1 2019, In : Scientific Reports. 9, 1, 4163.

Research output: Contribution to journal › Article

Open Access

Cerebrospinal Fluid

Amyloid

Alzheimer Disease

Positron-Emission Tomography

Area Under Curve

Abnormal Golgi morphology and decreased COPI function in cells with low levels of SMN

Custer, S. K., Foster, J. N., Astroski, J. W. & Androphy, E., Mar 1 2019, In : Brain Research. 1706, p. 135-146 12 p.

Research output: Contribution to journal › Article

Coatomer Protein

Coat Protein Complex I

Golgi Apparatus

Motor Neurons

Protein Binding

Accelerometry Data in Health Research: Challenges and Opportunities: Review and Examples

Karas, M., Bai, J., Strączkiewicz, M., Harezlak, J., Glynn, N. W., Harris, T., Zipunnikov, V., Crainiceanu, C. & Urbanek, J. K., Jan 1 2019, (Accepted/In press) In : Statistics in Biosciences.

Research output: Contribution to journal › Article

Accelerometry

Accelerometers

Labeling

Explosions

Synchronization

Acetylation of E2 by P300 Mediates Topoisomerase Entry at the Papillomavirus Replicon

Thomas, Y. & Androphy, E., Apr 1 2019, In : Journal of virology. 93, 7

Research output: Contribution to journal › Article

replicon

Replicon

Papillomaviridae

acetylation

Acetylation

Acquired Factor X Deficiency in Patients With Primary Light Chain Amyloidosis

Dejhansathit, S. & Suvannasankha, A., Mar 1 2019, In : Journal of Investigative Medicine High Impact Case Reports. 7

Research output: Contribution to journal › Article

Open Access

Factor X Deficiency

Factor X

Amyloidosis

Amyloidogenic Proteins

Light

Acute Ethanol Exposure Augments Low-Dose UVB-Mediated Systemic Immunosuppression via Enhanced Production of Platelet-Activating Factor Receptor Agonists

Travers, J., Weyerbacher, J., Ocana, J. A., Borchers, C., Rapp, C. M. & Sahu, R. P., Jan 1 2019, In : Journal of Investigative Dermatology.

Research output: Contribution to journal › Article

Immunosuppression

Ethanol

platelet activating factor receptor

ACUTE Heart Failure Risk Stratification: A Step Closer to the Holy Grail?

Collins, S. P. & Pang, P., Feb 26 2019, In : Circulation. 139, 9, p. 1157-1161 5 p.

Research output: Contribution to journal › Review article

Patient Discharge

Hospital Emergency Service

Hospitalization

Heart Failure

Adenocarcinoma of the Rete Testis: Clinicopathologic and Immunohistochemical Characterization of 6 Cases and Review of the Literature

Al-Obaidy, K. I., Idrees, M., Grignon, D. & Ulbright, T., Jan 1 2019, (Accepted/In press) In : American Journal of Surgical Pathology.

Research output: Contribution to journal › Article

Rete Testis

Mesothelioma

Adenocarcinoma

Adherence to clinical guidelines is associated with reduced inpatient mortality among children with severe anemia in Ugandan hospitals

Opoka, R. O., Ssemata, A. S., Oyang, W., Nambuya, H., John, C., Karamagi, C. & Tumwine, J. K., Jan 1 2019, In : PLoS One. 14, 1, e0210982.

Research output: Contribution to journal › Article

Child Mortality

anemia

Anemia

Inpatients

Guidelines

Adiposity, Insulin Resistance, and Bone Mass in Children and Adolescents

Kindler, J. M., Lobene, A. J., Vogel, K. A., Martin, B. R., McCabe, L. D., Peacock, M., Warden, S. J., McCabe, G. P. & Weaver, C. M., Mar 1 2019, In : The Journal of clinical endocrinology and metabolism. 104, 3, p. 892-899 8 p.

Research output: Contribution to journal › Article

Adiposity

Insulin Resistance

Bone

Insulin

Bone and Bones

Advance Care Planning in A Preoperative Clinic: A Retrospective Chart Review

Sinha, S., Gruber, R. N., Cottingham, A. H., Nation, B., Lane, K. A., Bo, N. & Torke, A., Jan 1 2019, (Accepted/In press) In : Journal of General Internal Medicine.

Research output: Contribution to journal › Article

Advance Care Planning

Advice Regarding Alcohol Use by Individuals With Nonalcoholic Fatty Liver Disease: Primum non nocere

Dunn, W. & Chalasani, N., Jan 1 2019, In : Hepatology. 69, 1, p. 9-11 3 p.

Research output: Contribution to journal › Editorial

Alcohols

Non-alcoholic Fatty Liver Disease

3 Citations (Scopus)

AGA Clinical Practice Update on Functional Gastrointestinal Symptoms in Patients With Inflammatory Bowel Disease: Expert Review

Colombel, J. F., Shin, A. & Gibson, P. R., Feb 1 2019, In : Clinical Gastroenterology and Hepatology. 17, 3, p. 380-390.e1

Research output: Contribution to journal › Review article

Inflammatory Bowel Diseases

Practice Guidelines

Leukocyte L1 Antigen Complex

Constipation

Complementary Therapies

Age-of-diagnosis dependent ileal immune intensification and reduced alpha-defensin in older versus younger pediatric Crohn Disease patients despite already established dysbiosis

Haberman, Y., Schirmer, M., Dexheimer, P. J., Karns, R., Braun, T., Kim, M. O., Walters, T. D., Baldassano, R. N., Noe, J. D., Rosh, J., Markowitz, J., Crandall, W. V., Mack, D. R., Griffiths, A. M., Heyman, M. B., Baker, S. S., Kellermayer, R., Moulton, D., Patel, A. S., Gulati, A. S. & 18 othersSteiner, S., LeLeiko, N., Otley, A., Oliva-Hemker, M., Ziring, D., Kirschner, B. S., Keljo, D. J., Guthery, S. L., Cohen, S. A., Snapper, S., Evans, J., Dubinsky, M., Aronow, B., Hyams, J. S., Kugathasan, S., Huttenhower, C., Xavier, R. J. & Denson, L. A., Mar 1 2019, In : Mucosal Immunology. 12, 2, p. 491-502 12 p.

Research output: Contribution to journal › Article

alpha-Defensins

Dysbiosis

Paneth Cells

Peyer's Patches

Mucosal Immunity

Aggressive Surveillance Is Needed to Detect Endoleaks and Junctional Separation between Device Components after Zenith Fenestrated Aortic Reconstruction

Wang, S. K., Lemmon, G., Gupta, A. K., Dalsing, M., Sawchuk, A., Motaganahalli, R., Murphy, M. & Fajardo, A., Jan 1 2019, In : Annals of Vascular Surgery.

Research output: Contribution to journal › Article

Endoleak

Equipment and Supplies

Aneurysm

Rupture

Incidence

A laser-guided spinal cord displacement injury in adult mice

Wu, X., Qu, W., Bakare, A. A., Zhang, Y. P., Fry, C. M. E., Shields, L. B. E., Shields, C. B. & Xu, X-M., Feb 1 2019, In : Journal of Neurotrauma. 36, 3, p. 460-468 9 p.

Research output: Contribution to journal › Article

Spinal Cord Injuries

Lasers

Wounds and Injuries

Walking

Spinal Cord

All electrophysiologists have ADD: Is a cure in sight?

Miller, J. & Shirazi, J. T., Feb 1 2019, In : Heart Rhythm. 16, 2, p. 170-171 2 p.

Research output: Contribution to journal › Editorial

Altered bile acid profile associates with cognitive impairment in Alzheimer's disease—An emerging role for gut microbiome

Alzheimer's Disease Neuroimaging Initiative and the Alzheimer Disease Metabolomics Consortium, Jan 1 2019, In : Alzheimer's and Dementia. 15, 1, p. 76-92 17 p.

Research output: Contribution to journal › Article

Open Access

Metabolomics

Metabolome

Bile Acids and Salts

Immunity

Alzheimer Disease

1 Citation (Scopus)

Altered bile acid profile in mild cognitive impairment and Alzheimer's disease: Relationship to neuroimaging and CSF biomarkers

Alzheimer's Disease Neuroimaging Initiative and the Alzheimer Disease Metabolomics Consortium, Feb 1 2019, In : Alzheimer's and Dementia. 15, 2, p. 232-244 13 p.

Research output: Contribution to journal › Article

Bile Acids and Salts

Neuroimaging

Cerebrospinal Fluid

Alzheimer Disease

Biomarkers

Alternative lengthening of telomeres (ALT) influences survival in soft tissue sarcomas: A systematic review with meta-analysis

Lawlor, R. T., Veronese, N., Pea, A., Nottegar, A., Smith, L., Pilati, C., Demurtas, J., Fassan, M., Cheng, L. & Luchini, C., Mar 14 2019, In : BMC Cancer. 19, 1, 232.

Research output: Contribution to journal › Review article

Open Access

Telomere Homeostasis

Sarcoma

Meta-Analysis

Survival

Odds Ratio

Ambulatory Blood Pressure Reduction With SGLT-2 Inhibitors: Dose-Response Meta-analysis and Comparative Evaluation With Low-Dose Hydrochlorothiazide

Georgianos, P. I. & Agarwal, R., Apr 1 2019, In : Diabetes care. 42, 4, p. 693-700 8 p.

Research output: Contribution to journal › Review article

Sodium-Glucose Transport Proteins

Hydrochlorothiazide

Meta-Analysis

Blood Pressure

Randomized Controlled Trials

2 Citations (Scopus)

Amiodarone for prevention of atrial fibrillation following esophagectomy

Tisdale, J. E., Jaynes, H. A., Watson, M. R., Corya, A. L., Shen, C. & Kesler, K., Jan 1 2019, In : Journal of Thoracic and Cardiovascular Surgery.

Research output: Contribution to journal › Article

Esophagectomy

Amiodarone

Atrial Fibrillation

Length of Stay

Incidence

A Missense Variant in PTPN22 is a Risk Factor for Drug-induced Liver Injury

Drug-Induced Liver Injury Network (DILIN) investigators & International DILI consortium (iDILIC), May 1 2019, In : Gastroenterology. 156, 6, p. 1707-1716.e2

Research output: Contribution to journal › Article

Chemical and Drug Induced Liver Injury

Protein Tyrosine Phosphatases

Genome-Wide Association Study

Inflammation

Mutation

A multi-institutional analysis of transcarotid artery revascularization compared to carotid endarterectomy

Kashyap, V. S., King, A. H., Foteh, M. I., Janko, M., Jim, J., Motaganahalli, R., Apple, J. M., Bose, S. & Kumins, N. H., Jan 1 2019, (Accepted/In press) In : Journal of vascular surgery.

Research output: Contribution to journal › Article

Carotid Endarterectomy

Arteries

Stroke

Cranial Nerve Injuries

clopidogrel

An aliasing polysomnographic finding

Sunwoo, B., Teodorescu, M., Rajagopal, A., Sigua, N. L., Bodkin, C. & Manchanda, S., Feb 1 2019, In : Annals of the American Thoracic Society. 16, 2, p. 268-270 3 p.

Research output: Contribution to journal › Article

An alternative payment model to support widespread use of collaborative dementia care models

Boustani, M., Alder, C. A., Solid, C. A. & Reuben, D., Jan 1 2019, In : Health Affairs. 38, 1, p. 54-59 6 p.

Research output: Contribution to journal › Article

Dementia

Independent Living

Insurance Coverage

Caregivers

Motivation

Analysis of Autophagy for Liver Pathogenesis

Huda, N., Zou, H., Yan, S., Khambu, B. & Yin, X-M., Jan 1 2019, In : Methods in molecular biology (Clifton, N.J.). 1880, p. 481-489 9 p.

Research output: Contribution to journal › Article

Autophagy

Liver Diseases

Liver

Fatty Liver

Lipid Peroxidation

Analysis of serum Hsp90 as a potential biomarker of β cell autoimmunity in type 1 diabetes

Ocaña, G. J., Sims, E. K., Watkins, R. A., Ragg, S., Mather, K., Oram, R. A., Mirmira, R., DiMeglio, L., Blum, J. & Evans-Molina, C., Jan 1 2019, In : PLoS One. 14, 1, e0208456.

Research output: Contribution to journal › Article

HSP90 Heat-Shock Proteins

autoimmunity

insulin-dependent diabetes mellitus

Biomarkers

Medical problems

Analysis of the 2017 American Society for Radiation Oncology (ASTRO) Research Portfolio

Yu, J. B., Beck, T. F., Anscher, M. S., Baschnagel, A. M., Brock, K. K., Carlson, D. J., Dominello, M. M., Kimple, R. J., Knisely, J. P., Mendonca, M., Mian, O. Y., Singh, A. K., Moros, E. G. & Keen, J. C., Feb 1 2019, In : International Journal of Radiation Oncology Biology Physics. 103, 2, p. 297-304 8 p.

Research output: Contribution to journal › Article

Radiation Oncology

Organized Financing

radiation

Research

National Institutes of Health (U.S.)

Analysis of whole genome-transcriptomic organization in brain to identify genes associated with alcoholism

Kapoor, M., Wang, J. C., Farris, S. P., Liu, Y., McClintick, J., Gupta, I., Meyers, J. L., Bertelsen, S., Chao, M., Nurnberger, J., Tischfield, J., Harari, O., Zeran, L., Hesselbrock, V., Bauer, L., Raj, T., Porjesz, B., Agrawal, A., Foroud, T., Edenberg, H. & 2 othersMayfield, R. D. & Goate, A., Dec 1 2019, In : Translational psychiatry. 9, 1, 89.

Research output: Contribution to journal › Article

Alcoholism

Genome

Alcohol Drinking

Brain

Genes

Analytical Validation of Variants to Aid in Genotype-Guided Therapy for Oncology

Swart, M., Stansberry, W. M., Pratt, V. M., Medeiros, E. B., Kiel, P. J., Shen, F., Schneider, B. & Skaar, T., May 1 2019, In : Journal of Molecular Diagnostics. 21, 3, p. 491-502 12 p.

Research output: Contribution to journal › Article

Genotype

Therapeutics

Validation Studies

Pharmacogenetics

Practice Guidelines

Analytical validity of a genotyping assay for use with personalized antihypertensive and chronic kidney disease therapy

Collins, K. S., Pratt, V. M., Stansberry, W. M., Medeiros, E. B., Kannegolla, K., Swart, M., Skaar, T., Chapman, A. B., Decker, B., Moorthi, R. & Eadon, M., Jan 1 2019, In : Pharmacogenetics and Genomics. 29, 1, p. 18-22 5 p.

Research output: Contribution to journal › Article

Chronic Renal Insufficiency

Antihypertensive Agents

Hypertension

Disease Progression

Kidney Diseases

An Appreciative Approach to Burnout

Gunderman, R., Jan 1 2019, In : Academic Radiology.

Research output: Contribution to journal › Comment/debate

Radiology

Radiologists

Anastrozole Aromatase Inhibitor Plasma Drug Concentration Genome-Wide Association Study: Functional Epistatic Interaction Between SLC38A7 and ALPPL2

Dudenkov, T. M., Liu, D., Cairns, J., Devarajan, S., Zhuang, Y., Ingle, J. N., Buzdar, A. U., Robson, M. E., Kubo, M., Batzler, A., Barman, P., Jenkins, G. D., Carlson, E. E., Goetz, M. P., Northfelt, D. W., Moreno-Aspitia, A., Desta, Z., Reid, J. M., Kalari, K. R., Wang, L. & 1 othersWeinshilboum, R. M., Jan 1 2019, In : Clinical Pharmacology and Therapeutics.

Research output: Contribution to journal › Article

Open Access

Aromatase Inhibitors

Genome-Wide Association Study

Single Nucleotide Polymorphism

Pharmaceutical Preparations

Breast Neoplasms

1 Citation (Scopus)

A Nationwide Study Comparing Knowledge and Beliefs about HPV among Female Students before and after HPV Vaccination

Wong, L. P., Alias, H., Sam, I. C. & Zimet, G., Jan 1 2019, (Accepted/In press) In : Journal of Pediatric and Adolescent Gynecology.

Research output: Contribution to journal › Article

Vaccination

Students

Papillomavirus Vaccines

Papillomavirus Infections

Immunization Programs

2 Citations (Scopus)

An educational intervention to improve HPV vaccination: A cluster randomized trial

Dixon, B., Zimet, G., Xiao, S., Tu, W., Lindsay, B., Church, A. & Downs, S., Jan 1 2019, In : Pediatrics. 143, 1, e20181457.

Research output: Contribution to journal › Article

Papillomavirus Vaccines

Vaccination

Parents

Vaccines

Odds Ratio

A new highly sensitive real-time quantitative-PCR method for detection of BCR-ABL1 to monitor minimal residual disease in chronic myeloid leukemia after discontinuation of imatinib

Kitamura, H., Tabe, Y., Ai, T., Tsuchiya, K., Yuri, M., Misawa, S., Horii, T., Kawaguchi, A., Ohsaka, A. & Kimura, S., Mar 1 2019, In : PLoS ONE. 14, 3, e0207170.

Research output: Contribution to journal › Article

Open Access

myeloid leukemia

Polymerase chain reaction

Residual Neoplasm

Leukemia, Myelogenous, Chronic, BCR-ABL Positive

chronic diseases

1 Citation (Scopus)

An exploration of concomitant psychiatric disorders in children with autism spectrum disorder

Lecavalier, L., McCracken, C. E., Aman, M. G., McDougle, C. J., McCracken, J. T., Tierney, E., Smith, T., Johnson, C., King, B., Handen, B., Swiezy, N., Eugene Arnold, L., Bearss, K., Vitiello, B. & Scahill, L., Jan 1 2019, In : Comprehensive Psychiatry. 88, p. 57-64 8 p.

Research output: Contribution to journal › Article

Psychiatry

Attention Deficit and Disruptive Behavior Disorders

Attention Deficit Disorder with Hyperactivity

Anxiety Disorders

Conduct Disorder

An Interprofessional Quality Improvement Training Program That Improves Educational and Quality Outcomes

Baernholdt, M., Feldman, M., Davis-Ajami, M. L., Harvey, L. D., Mazmanian, P. E., Mobley, D., Murphy, J. K., Watts, C. & Dow, A., Jan 1 2019, In : American Journal of Medical Quality.

Research output: Contribution to journal › Article

Quality Improvement

Education

Self Efficacy

Workplace

Inpatients

Annual review issue: Urologic pathology: a remarkable journey of innovation

Cheng, L. & Berney, D. M., Jan 1 2019, In : Histopathology. 74, 1, 1 p.

Research output: Contribution to journal › Editorial

Pathology

A novel fluorescent clinical method to rapidly quantify plasma volume

Molitoris, B., George, A. G., Murray, P. T., Meier, D., Reilly, E. S., Barreto, E., Sandoval, R. M., Rizk, D. V., Shaw, A. D. & Peacock, W. F., Mar 1 2019, In : CardioRenal Medicine. 9, 3, p. 168-179 12 p.

Research output: Contribution to journal › Article

Open Access

Plasma Volume

Healthy Volunteers

Blood Volume

Dextrans

Fluorescent Dyes

Antimicrobial susceptibility of streptococcus pneumoniae from North America, Europe, Latin America, and the Asia-Pacific Region: Results from 20 years of the SENTRY Antimicrobial Surveillance Program (1997-2016)

Sader, H. S., Mendes, R. E., Le, J., Denys, G., Flamm, R. K. & Jones, R. N., Mar 15 2019, In : Open Forum Infectious Diseases. 6, p. S14-S22

Research output: Contribution to journal › Article

Open Access

Pneumococcal Vaccines

Linezolid

Latin America

North America

Streptococcus pneumoniae

An unusual arteriovenous malformation involving the cervical vessels treated with endovascular repair

Miladore, J. N. & Sawchuk, A., Jun 1 2019, In : Journal of Vascular Surgery Cases and Innovative Techniques. 5, 2, p. 136-138 3 p.

Research output: Contribution to journal › Article

Open Access

Arteriovenous Malformations

Jugular Veins

Endovascular Procedures

Subclavian Artery

Vertebral Artery

A pair of peptides inhibits seeding of the hormone transporter transthyretin into amyloid fibrils

Saelices, L., Nguyen, B. A., Chung, K., Wang, Y., Ortega, A., Lee, J. H., Coelho, T., Bijzet, J., Benson, M. & Eisenberg, D. S., Jan 1 2019, In : Journal of Biological Chemistry. 294, 15, p. 6130-6141 12 p.

Research output: Contribution to journal › Article

Open Access

Prealbumin

Amyloid

Hormones

Peptides

Familial Amyloidosis