Find Publications


Longitudinal optogenetic motor mapping revealed structural and functional impairments and enhanced corticorubral projection after contusive spinal cord injury in Mice

Qian, J., Wu, W., Xiong, W., Chai, Z., Xu, X-M. & Jin, X., Feb 1 2019, In : Journal of Neurotrauma. 36, 3, p. 485-499 15 p.

Research output: Contribution to journalArticle

Spinal Cord Injuries
Red Nucleus

Longitudinal Reproducibility of MR Perfusion Using 3D Pseudocontinuous Arterial Spin Labeling With Hadamard-Encoded Multiple Postlabeling Delays

Cohen, A. D., Agarwal, M., Jagra, A. S., Nencka, A. S., Meier, T. B., Lebel, R. M., McCrea, M. A. & Wang, Y., Jan 1 2019, (Accepted/In press) In : Journal of Magnetic Resonance Imaging.

Research output: Contribution to journalArticle

Cerebrovascular Circulation
Brain Diseases
Sample Size
Analysis of Variance
2 Citations (Scopus)

Long-Overdue Guidelines for the Cord Blood Banking Community

Broxmeyer, H., Apr 1 2019, In : Stem Cells Translational Medicine. 8, 4, p. 320-322 3 p.

Research output: Contribution to journalComment/debate

Open Access
Blood Banks
Fetal Blood
1 Citation (Scopus)

Long-term diabetic microenvironment augments the decay rate of capsaicin-induced currents in mouse dorsal root ganglion neurons

Chen, X., Duan, Y., Riley, A. M., Welch, M. A., White, F., Grant, M. B. & Obukhov, A., Feb 21 2019, In : Molecules. 24, 4, 775.

Research output: Contribution to journalArticle

Open Access
Induced currents
Spinal Ganglia
decay rates
8 Citations (Scopus)
Myasthenia Gravis
National Institute of Neurological Disorders and Stroke

Long-Term Engraftment of ESC-Derived B-1 Progenitor Cells Supports HSC-Independent Lymphopoiesis

Lin, Y., Kobayashi, M., Azevedo Portilho, N., Mishra, A., Gao, H., Liu, Y., Wenzel, P., Davis, B., Yoder, M. & Yoshimoto, M., Mar 5 2019, In : Stem Cell Reports. 12, 3, p. 572-583 12 p.

Research output: Contribution to journalArticle

Open Access
B-Lymphoid Precursor Cells
Embryonic Stem Cells
Hematopoietic Stem Cells
Stem cells
7 Citations (Scopus)
Fatty Liver
Hepatocellular Carcinoma

Long-term pain outcomes for recurrent idiopathic trigeminal neuralgia after stereotactic radiosurgery: A prospective comparison of first-time microvascular decompression and repeat stereotactic radiosurgery

Raygor, K. P., Wang, D. D., Ward, M. M., Barbaro, N. M. & Chang, E. F., Oct 2019, In : Journal of neurosurgery. 131, 4, p. 1207-1215 9 p.

Research output: Contribution to journalArticle

Microvascular Decompression Surgery
Trigeminal Neuralgia
San Francisco
1 Citation (Scopus)

Long-term prescription opioid utilization, substance use disorders, and opioid overdoses after adolescent trauma

Bell, T. M., Raymond, J., Vetor, A., Mongalo, A., Adams, Z., Rouse, T. & Carroll, A., Oct 1 2019, In : The journal of trauma and acute care surgery. 87, 4, p. 836-840 5 p.

Research output: Contribution to journalArticle

Opioid Analgesics
Substance-Related Disorders
Wounds and Injuries
Mental Health
11 Citations (Scopus)

Long-term safety and efficacy of eculizumab in generalized myasthenia gravis

for the Regain Study Group, Jul 2019, In : Muscle and Nerve. 60, 1, p. 14-24 11 p.

Research output: Contribution to journalArticle

Open Access
Myasthenia Gravis
Meningococcal Infections
Muscle Strength
Activities of Daily Living

Long term survival after lung transplantation: A single center experience

Blitzer, D., Copeland, H., Roe, D., Hage, C., Wang, I. W., Duncan, M., Manghelli, J., Gooch, D. & Wozniak, T., Jan 1 2019, (Accepted/In press) In : Journal of Cardiac Surgery.

Research output: Contribution to journalArticle

Lung Transplantation
6 Citations (Scopus)

Long-term weight loss with metformin or lifestyle intervention in the Diabetes prevention Program outcomes study

Diabetes Prevention Program Research Group, Jan 1 2019, In : Annals of internal medicine. 170, 10, p. 682-690 9 p.

Research output: Contribution to journalArticle

Life Style
Weight Loss
Outcome Assessment (Health Care)
Weights and Measures

Loss of diurnal oscillatory rhythms in gut microbiota correlates with changes in circulating metabolites in type 2 diabetic db/db mice

Beli, E., Prabakaran, S., Krishnan, P., Evans-Molina, C. & Grant, M. B., Oct 2019, In : Nutrients. 11, 10, 2310.

Research output: Contribution to journalArticle

Open Access
Circadian Rhythm
intestinal microorganisms
circadian rhythm
1 Citation (Scopus)

Loss of FKBP5 Affects Neuron Synaptic Plasticity: An Electrophysiology Insight

Qiu, B., Xu, Y., Wang, J., Liu, M., Dou, L., Deng, R., Wang, C., Williams, K. E., Stewart, R. B., Xie, Z., Ren, W., Zhao, Z., Shou, W., Liang, T. & Yong, W., Mar 15 2019, In : Neuroscience. 402, p. 23-36 14 p.

Research output: Contribution to journalArticle

Neuronal Plasticity
Long-Term Potentiation
Glucocorticoid Receptors
3 Citations (Scopus)

Loss of function of NCOR1 and NCOR2 impairs memory through a novel GABAergic hypothalamus–CA3 projection

DDD study, Feb 1 2019, In : Nature Neuroscience. 22, 2, p. 205-217 13 p.

Research output: Contribution to journalArticle

Lateral Hypothalamic Area
GABAergic Neurons
Co-Repressor Proteins
Memory Disorders
gamma-Aminobutyric Acid
1 Citation (Scopus)

Loss of NF-κB p50 function synergistically augments microglial priming in the middle-aged brain

Taetzsch, T., Benusa, S., Levesque, S., Mumaw, C. L. & Block, M., Mar 12 2019, In : Journal of Neuroinflammation. 16, 1, 60.

Research output: Contribution to journalArticle

Open Access
Inbred C57BL Mouse
Transcription Factor RelA

Loss of Nmp4 optimizes osteogenic metabolism and secretion to enhance bone quality

Shao, Y., Wichern, E., Childress, P. J., Adaway, M., Misra, J., Klunk, A., Burr, D., Wek, R., Mosley, A., Liu, Y., Robling, A., Broustovetski, N., Hamilton, J., Jacobs, K., Vashishth, D., Stayrook, K. R., Allen, M., Wallace, J. M. & Bidwell, J., May 1 2019, In : American journal of physiology. Endocrinology and metabolism. 316, 5, p. E749-E772

Research output: Contribution to journalArticle

Mesenchymal Stromal Cells
Bone and Bones
3 Citations (Scopus)

Low-dose anti-thymocyte globulin preserves C-peptide, reduces HbA1c, and increases regulatory to conventional T-cell ratios in new-onset type 1 diabetes: Two-year clinical trial data

Type 1 Diabetes TrialNet ATG-GCSF Study Group, Jun 1 2019, In : Diabetes. 68, 6, p. 1267-1276 10 p.

Research output: Contribution to journalArticle

Open Access
Antilymphocyte Serum
Type 1 Diabetes Mellitus
Clinical Trials

Low Dose Carbon Monoxide Exposure in Idiopathic Pulmonary Fibrosis Produces a CO Signature Comprised of Oxidative Phosphorylation Genes

Casanova, N., Zhou, T., Gonzalez-Garay, M. L., Rosas, I. O., Goldberg, H. J., Ryter, S. W., Collard, H. R., El-Chemaly, S., Flaherty, K. R., Hunninghake, G. M., Lasky, J. A., Lederer, D. J., Machado, R. F., Martinez, F. J., Noth, I., Raghu, G., Choi, A. M. K. & Garcia, J. G. N., Dec 1 2019, In : Scientific reports. 9, 1, 14802.

Research output: Contribution to journalArticle

Open Access
Idiopathic Pulmonary Fibrosis
Oxidative Phosphorylation
Carbon Monoxide
Matrix Metalloproteinase 7
Left Ventricular Dysfunction
4 Citations (Scopus)

Low-grade oncocytic tumour of kidney (CD117-negative, cytokeratin 7-positive): a distinct entity?

Trpkov, K., Williamson, S. R., Gao, Y., Martinek, P., Cheng, L., Sangoi, A. R., Yilmaz, A., Wang, C., San Miguel Fraile, P., Perez Montiel, D. M., Bulimbasić, S., Rogala, J. & Hes, O., Jan 1 2019, In : Histopathology.

Research output: Contribution to journalArticle

MART-1 Antigen

Low-temperature plasma on peri-implant-related biofilm and gingival tissue

Carreiro, A. F. P., Delben, J. A., Guedes, S., Silveira, E. J. D., Janal, M. N., Vergani, C. E., Pushalkar, S. & Duarte, S., May 1 2019, In : Journal of periodontology. 90, 5, p. 507-515 9 p.

Research output: Contribution to journalArticle

Vascular Endothelial Growth Factor A
Porphyromonas gingivalis

Lrp4 Mediates Bone Homeostasis and Mechanotransduction through Interaction with Sclerostin In Vivo

Bullock, W. A., Hoggatt, A. M., Horan, D. J., Elmendorf, A. J., Sato, A. Y., Bellido, T., Loots, G. G., Pavalko, F. M. & Robling, A. G., Oct 25 2019, In : iScience. 20, p. 205-215 11 p.

Research output: Contribution to journalArticle

Open Access
Biological Science Disciplines
Cell Biology
Molecular Biology
Bone and Bones

LTL model checking based on binary classification of machine learning

Zhu, W., Wu, H. & Deng, M., Jan 1 2019, In : IEEE Access. 7, p. 135703-135719 17 p., 8845603.

Research output: Contribution to journalArticle

Open Access
Temporal logic
Model checking
Learning systems
Learning algorithms
1 Citation (Scopus)

LTMG: a novel statistical modeling of transcriptional expression states in single-cell RNA-Seq data

Wan, C., Chang, W., Zhang, Y., Shah, F., Lu, X., Zang, Y., Zhang, A., Cao, S., Fishel, M. L., Ma, Q. & Zhang, C., Oct 10 2019, In : Nucleic acids research. 47, 18, p. e111

Research output: Contribution to journalArticle

Open Access
Small Cytoplasmic RNA
Gene Expression
Sensitivity and Specificity
Messenger RNA

Luminescent conjugated oligothiophenes distinguish between α-synuclein assemblies of Parkinson's disease and multiple system atrophy

Klingstedt, T., Ghetti, B., Holton, J. L., Ling, H., Nilsson, K. P. R. & Goedert, M., Dec 3 2019, In : Acta Neuropathologica Communications. 7, 1, 193.

Research output: Contribution to journalArticle

Open Access
Multiple System Atrophy
Parkinson Disease
Cytomegalovirus Infections
Lewy Body Disease

Lutein Complex Supplementation Increases Ocular Blood Flow Biomarkers in Healthy Subjects

Harris, A., Siesky, B., Huang, A., Do, T., Mathew, S., Frantz, R., Gross, J., Januleviciene, I. & Verticchio Vercellin, A. C., Jul 1 2019, In : International journal for vitamin and nutrition research. Internationale Zeitschrift fur Vitamin- und Ernahrungsforschung. Journal international de vitaminologie et de nutrition. 89, 1-2, p. 5-12 8 p.

Research output: Contribution to journalArticle

Healthy Volunteers
Blood Pressure
Lysosome-Associated Membrane Glycoproteins
Coloring Agents

M1 muscarinic receptor is a key target of neuroprotection, neuroregeneration and memory recovery by i-Extract from Withania somnifera

Konar, A., Gupta, R., Shukla, R. K., Maloney, B., Khanna, V. K., Wadhwa, R., Lahiri, D. K. & Thakur, M. K., Dec 1 2019, In : Scientific reports. 9, 1, 13990.

Research output: Contribution to journalArticle

Open Access
Muscarinic M1 Receptors
Muscarinic Receptors
Scopolamine Hydrobromide
1 Citation (Scopus)

Machine learning to build and validate a model for radiation pneumonitis prediction in patients with non–small cell lung cancer

Yu, H., Wu, H., Wang, W., Jolly, S., Jin, J. Y., Hu, C. & Kong, F. M., Jan 1 2019, In : Clinical Cancer Research. 25, 14, p. 4343-4350 8 p.

Research output: Contribution to journalArticle

Radiation Pneumonitis
Non-Small Cell Lung Carcinoma

Macrophage PPAR-γ suppresses long-term lung fibrotic sequelae following acute influenza infection

Huang, S., Goplen, N. P., Zhu, B., Cheon, I. S., Son, Y., Wang, Z., Li, C., Dai, Q., Jiang, L., Xiang, M., Carmona, E. M., Vassallo, R., Limper, A. H. & Sun, J., Jan 1 2019, In : PLoS ONE. 14, 10, e0223430.

Research output: Contribution to journalArticle

Open Access
Peroxisome Proliferator-Activated Receptors
complications (disease)
Human Influenza

MAGEA1 inhibits the expression of BORIS via increased promoter methylation

Zhao, J., Wang, Y., Liang, Q., Xu, Y. & Sang, J., Jan 1 2019, In : Journal of Cell Science. 132, 1, jcs218628.

Research output: Contribution to journalArticle

Melanoma-Specific Antigens
Testicular Neoplasms
Breast Neoplasms
Cell Death

Magnetic nanoparticles localization in ophthalmologic surgery

Hajrasouliha, A. R., Springman, J., Parker, E., Washington, A., Akbari, R. & Izadian, A., May 2019, 2019 IEEE International Conference on Electro Information Technology, EIT 2019. IEEE Computer Society, p. 505-508 4 p. 8834079. (IEEE International Conference on Electro Information Technology; vol. 2019-May).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Manual control
Magnetic couplings
2 Citations (Scopus)
Chronic Pancreatitis
Pancreatic Neoplasms
Magnetic Resonance Imaging
Elasticity Imaging Techniques
3 Citations (Scopus)
Open Access
Chronic Renal Insufficiency
Atrial Fibrillation
1 Citation (Scopus)

Management of anastomotic leaks following esophagectomy: When to intervene?

Manghelli, J. L., Ceppa, M., Greenberg, J. W., Blitzer, D., Hicks, A., Rieger, K. & Birdas, T., Jan 1 2019, In : Journal of Thoracic Disease. 11, 1, p. 131-137 7 p.

Research output: Contribution to journalArticle

Anastomotic Leak
Length of Stay

Management of clinical T2N0 esophageal cancer: A review

Vining, P. & Birdas, T. J., Jan 1 2019, In : Journal of Thoracic Disease. 11, p. S1629-S1632

Research output: Contribution to journalReview article

Esophageal Neoplasms

Management of Glaucoma in Pregnancy

Mathew, S., Harris, A., Ridenour, C. M., Wirostko, B. M., Burgett, K. M., Scripture, M. D. & Siesky, B., Jan 1 2019, In : Journal of Glaucoma.

Research output: Contribution to journalArticle

Filtering Surgery
1 Citation (Scopus)

Management of Residual Mass in Germ Cell Tumors After Chemotherapy

Albany, C., Kesler, K. & Cary, K. C., Jan 1 2019, In : Current Oncology Reports. 21, 1, 5.

Research output: Contribution to journalReview article

Germ Cell and Embryonal Neoplasms
Drug Therapy
Positron-Emission Tomography
Induction Chemotherapy

Management of Unusual Proximal Radial Artery Aneurysm

Umana, L., Peshkepija, A., Yee, E. J., Liao, J., Donde, N. & Motaganahalli, R., Jan 1 2019, In : Vascular and Endovascular Surgery.

Research output: Contribution to journalArticle

Radial Artery
Rare Diseases
Upper Extremity
DNA Repair
1 Citation (Scopus)

Managing Chronic Pain in an Opioid Crisis: What Is the Role of Shared Decision-Making?

Matthias, M., Talib, T. L. & Huffman, M. A., Jan 1 2019, In : Health Communication.

Research output: Contribution to journalArticle

Chronic Pain
Opioid Analgesics
Decision Making
Decision making

Manganese porphyrin-based SOD mimetics produce polysulfides from hydrogen sulfide

Olson, K. R., Gao, Y., Arif, F., Patel, S., Yuan, X., Mannam, V., Howard, S., Batinic-Haberle, I., Fukuto, J., Minnion, M., Feelisch, M. & Straub, K. D., Dec 2019, In : Antioxidants. 8, 12, 639.

Research output: Contribution to journalArticle

Open Access
Hydrogen Sulfide
Superoxide Dismutase

Mapping and Ablation of Ventricle Arrhythmia in Patients with Left Ventricular Assist Devices

Devabhaktuni, S. R., Shirazi, J. T. & Miller, J. M., Dec 2019, In : Cardiac Electrophysiology Clinics. 11, 4, p. 689-697 9 p.

Research output: Contribution to journalReview article

Heart-Assist Devices
Cardiac Arrhythmias
Ablation Techniques
Catheter Ablation

Mapping of HIE CT terms to LOINC®: analysis of content-dependent coverage and coverage improvement through new term creation

Peng, P., Beitia, A. O., Vreeman, D., Loo, G. T., Delman, B. N., Thum, F., Lowry, T. & Shapiro, J. S., Jan 1 2019, In : Journal of the American Medical Informatics Association : JAMIA. 26, 1, p. 19-27 9 p.

Research output: Contribution to journalArticle

Logical Observation Identifiers Names and Codes
Health Information Exchange

Mapping the medical outcomes study HIV health survey (MOS-HIV) to the EuroQoL 5 Dimension (EQ-5D-3 L) utility index

Shi, Y., Thompson, J., Walker, A. S., Paton, N. I., Cheung, Y. B., Agweng, E., Awio, P., Bakeinyaga, G., Isabirye, C., Kabuga, U., Kasuswa, S., Katuramu, M., Kityo, C., Kiweewa, F., Kyomugisha, H., Lutalo, E., Mugyenyi, P., Mulima, D., Musana, H., Musitwa, G. & 259 others, Musiime, V., Ndigendawan, M., Namata, H., Nkalubo, J., Labejja, P. O., Okello, P., Olal, P., Pimundu, G., Segonga, P., Ssali, F., Tamale, Z., Tumukunde, D., Namala, W., Byaruhanga, R., Kayiwa, J., Tukamushaba, J., Abunyang, S., Eram, D., Denis, O., Lwalanda, R., Mugarura, L., Namusanje, J., Nankya, I., Ndashimye, E., Nabulime, E., Mulima, D., Senfuma, O., Bihabwa, G., Buluma, E., Easterbrook, P., Elbireer, A., Kambugu, A., Kamya, D., Katwere, M., Kiggundu, R., Komujuni, C., Laker, E., Lubwama, E., Mambule, I., Matovu, J., Nakajubi, A., Nakku, J., Nalumenya, R., Namuyimbwa, L., Semitala, F., Wandera, B., Wanyama, J., Mugerwa, H., Lugemwa, A., Ninsiima, E., Ssenkindu, T., Mwebe, S., Atwine, L., William, H., Katemba, C., Abunyang, S., Acaku, M., Ssebutinde, P., Kitizo, H., Kukundakwe, J., Naluguza, M., Ssegawa, K., Nsibuka, F., Tuhirirwe, P., Fortunate, M., Acen, J., Achidri, J., Amone, A., Chamai, M., Ditai, J., Kemigisa, M., Kiconco, M., Matama, C., Mbanza, D., Nambaziira, F., Odoi, M. O., Rweyora, A., Tumwebaze, G., Kalanzi, H., Katabaazi, J., Kiyingi, A., Mbidde, M., Mugenyi, M., Mwebaze, R., Okong, P., Senoga, I., Abwola, M., Baliruno, D., Bwomezi, J., Kasede, A., Mudoola, M., Namisi, R., Ssennono, F., Tuhirwe, S., Abongomera, G., Amone, G., Abach, J., Aciro, I., Arach, B., Kidega, P., Omongin, J., Ocung, E., Odong, W., Philliam, A., Alima, H., Ahimbisibwe, B., Atuhaire, E., Atukunda, F., Bekusike, G., Bulegyeya, A., Kahatano, D., Kamukama, S., Kyoshabire, J., Nassali, A., Mbonye, A., Naturinda, T. M., Nshabohurira, A., Ntawiha, H., Rogers, A., Tibyasa, M., Kiirya, S., Atwongyeire, D., Nankya, A., Draleku, C., Nakiboneka, D., Odoch, D., Lakidi, L., Ruganda, R., Abiriga, R., Mulindwa, M., Balmoi, F., Kafuma, S., Moriku, E., Hakim, J., Reid, A., Chidziva, E., Musoro, G., Warambwa, C., Tinago, G., Mutsai, S., Phiri, M., Mudzingwa, S., Bafana, T., Masore, V., Moyo, C., Nhema, R., Chitongo, S., Heyderman, R., Kabanga, L., Kaunda, S., Kudzala, A., Lifa, L., Mallewa, J., Moore, M., Mtali, C., Musowa, G., Mwimaniwa, G., Sikwese, R., Van Oosterhout, J., Ziwoya, M., Chimbaka, H., Chitete, B., Kamanga, S., Makwakwa, T. K. E., Mbiya, R., Mlenga, M., Mphande, T., Mtika, C., Mushani, G., Ndhlovu, O., Ngonga, M., Nkhana, I., Nyirenda, R., Cheruiyot, P., Kwobah, C., Ekiru, W. L., Mokaya, M., Mudogo, A., Nzioka, A., Siika, A., Tanui, M., Wachira, S., Wools-Kaloustian, K., Alipalli, P., Chikatula, E., Kipaila, J., Kunda, I., Lakhi, S., Malama, J., Mufwambi, W., Mulenga, L., Mwaba, P., Mwamba, E., Mweemba, A., Namfukwe, M., Kerukadho, E., Ngwatu, B., Birungi, J., Paton, N., Boles, J., Burke, A., Castle, L., Ghuman, S., Kendall, L., Hoppe, A., Tebbs, S., Thomason, M., Thompson, J., Walker, S., Whittle, J., Wilkes, H., Young, N., Kapuya, C., Kyomuhendo, F., Kyakundi, D., Mkandawire, N., Mulambo, S., Senyonjo, S., Angus, B., Arenas-Pinto, A., Palfreeman, A., Post, F., Ishola, D., Arribas, J., Colebunders, R., Floridia, M., Giuliano, M., Mallon, P., Walsh, P., De Rosa, M., Rinaldi, E., Weller, I., Gilks, C., Hakim, J., Kangewende, A., Lakhi, S., Luyirika, E., Miiro, F., Mwamba, P., Mugyenyi, P., Ojoo, S., Paton, N., Phiri, S., Van Oosterhout, J., Siika, A., Walker, S., Wapakabulo, A., Peto, T., French, N., Matenga, J., Cloherty, G., Van Wyk, J., Norton, M., Lehrman, S., Lamba, P., Malik, K., Rooney, J., Snowden, W. & Villacian, J., May 10 2019, In : Health and Quality of Life Outcomes. 17, 1, 83.

Research output: Contribution to journalArticle

Open Access
Health Surveys
Outcome Assessment (Health Care)
Least-Squares Analysis
Viral Load
Bone and Bones
Parathyroid Hormone
Vitamin D

Market and organizational factors associated with hospital vertical integration into sub-acute care

Hogan, T. H., Lemak, C. H., Hearld, L. R., Sen, B. P., Wheeler, J. R. C. & Menachemi, N., Apr 1 2019, In : Health Care Management Review. 44, 2, p. 137-147 11 p.

Research output: Contribution to journalArticle

Subacute Care
Skilled Nursing Facilities
Organizational factors
Vertical integration
2 Citations (Scopus)

Mass Exodus of State Health Department Deputies and Senior Management Threatens Institutional Stability

Beitsch, L. M., Yeager, V. A., Leider, J. P. & Erwin, P. C., May 1 2019, In : American journal of public health. 109, 5, p. 681-683 3 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Maternal lipid profile differs by gestational diabetes physiologic subtype

Layton, J., Powe, C., Allard, C., Battista, M. C., Doyon, M., Bouchard, L., Perron, P., Wessel, J. & Hivert, M. F., Feb 1 2019, In : Metabolism: Clinical and Experimental. 91, p. 39-42 4 p.

Research output: Contribution to journalArticle

Gestational Diabetes
Fatty Acids