A new survival model based on ferroptosis-related genes for prognostic prediction in clear cell renal cell carcinoma

Guangzhen Wu, Qifei Wang, Yingkun Xu, Quanlin Li, Liang Cheng

Research output: Contribution to journalArticle

Abstract

In this study, we analyzed the clinical significance of ferroptosis-related genes (FRGs) in 32 cancer types in the GSCA database. We detected a 2-82% mutation rate among 36 FRGs. In clear cell renal cell carcinoma (ccRCC; n=539) tissues from the The Cancer Genome Atlas database, 30 of 36 FRGs were differentially expressed (up-or down-regulated) compared to normal kidney tissues (n=72). Consensus clustering analysis identified two clusters of FRGs based on similar co-expression in ccRCC tissues. We then used LASSO regression analysis to build a new survival model based on five risk-related FRGs (CARS, NCOA4, FANCD2, HMGCR, and SLC7A11). Receiver operating characteristic curve analysis confirmed good prognostic performance of the new survival model with an area under the curve of 0.73. High FANCD2, CARS, and SLC7A11 expression and low HMGCR and NCOA4 expression were associated with high-risk ccRCC patients. Multivariate analysis showed that risk score, age, stage, and grade were independent risk factors associated with prognosis in ccRCC. These findings demonstrate that this five risk-related FRG-based survival model accurately predicts prognosis in ccRCC patients, and suggest FRGs are potential prognostic biomarkers and therapeutic targets in several cancer types.

Original languageEnglish (US)
Pages (from-to)14933-14948
Number of pages16
JournalAging
Volume12
Issue number14
DOIs
StatePublished - Jul 31 2020

Keywords

  • Clear cell renal cell carcinoma
  • Ferroptosis
  • Kidney
  • Pan-cancer biomarker
  • Prognosis/survival

ASJC Scopus subject areas

  • Aging
  • Cell Biology

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