Interaction between DNA polymerase λ and anticancer nucleoside analogs

Miguel Garcia-Diaz, Michael S. Murray, Thomas A. Kunkel, Kai Ming Chou

Research output: Contribution to journalArticle

11 Citations (Scopus)

Abstract

The anticancer activity of cytarabine (AraC) and gemcitabine (dFdC) is thought to result from chain termination after incorporation into DNA. To investigate their incorporation into DNA at atomic level resolution, we present crystal structures of human DNA polymerase λ (Pol λ) bound to gapped DNA and containing either AraC or dFdC paired opposite template dG. These structures reveal that AraC and dFdC can bind within the nascent base pair binding pocket of Pol λ. Although the conformation of the ribose of AraCTP is similar to that of normal dCTP, the conformation of dFdCTP is significantly different. Consistent with these structures, Pol λ efficiently incorporates AraCTP but not dFdCTP. The data are consistent with the possibility that Pol λ could modulate the cytotoxic effect of AraC.

Original languageEnglish
Pages (from-to)16874-16879
Number of pages6
JournalJournal of Biological Chemistry
Volume285
Issue number22
DOIs
StatePublished - May 28 2010

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Cytarabine
DNA-Directed DNA Polymerase
Nucleosides
gemcitabine
Conformations
DNA
Ribose
Base Pairing
Crystal structure

ASJC Scopus subject areas

  • Biochemistry
  • Cell Biology
  • Molecular Biology

Cite this

Garcia-Diaz, M., Murray, M. S., Kunkel, T. A., & Chou, K. M. (2010). Interaction between DNA polymerase λ and anticancer nucleoside analogs. Journal of Biological Chemistry, 285(22), 16874-16879. https://doi.org/10.1074/jbc.M109.094391

Interaction between DNA polymerase λ and anticancer nucleoside analogs. / Garcia-Diaz, Miguel; Murray, Michael S.; Kunkel, Thomas A.; Chou, Kai Ming.

In: Journal of Biological Chemistry, Vol. 285, No. 22, 28.05.2010, p. 16874-16879.

Research output: Contribution to journalArticle

Garcia-Diaz, M, Murray, MS, Kunkel, TA & Chou, KM 2010, 'Interaction between DNA polymerase λ and anticancer nucleoside analogs', Journal of Biological Chemistry, vol. 285, no. 22, pp. 16874-16879. https://doi.org/10.1074/jbc.M109.094391
Garcia-Diaz, Miguel ; Murray, Michael S. ; Kunkel, Thomas A. ; Chou, Kai Ming. / Interaction between DNA polymerase λ and anticancer nucleoside analogs. In: Journal of Biological Chemistry. 2010 ; Vol. 285, No. 22. pp. 16874-16879.
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